Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_007063.1 Length=43231 Score E Sequences producing significant alignments: (Bits) Value seq89 253 6e-63 >seq89 Length=3091062 Score = 253 bits (280), Expect = 6e-63 Identities = 247/318 (78%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 33131 AATGTTAAATAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAAC 33190 |||| |||||||| || ||||| || || ||||| ||||||||||||||||||||||| Sbjct 140632 AATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACAAC 140573 Query 33191 GCCAAATGGTGTGAGTGTTACCACTTTCACTATCGCAGTTAACAGAACATTTACTAACGC 33250 || || ||||||||| | ||||| ||| | ||||| ||| | || ||||| || || Sbjct 140572 ACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAATGC 140513 Query 33251 TCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTTTTAGAAAACAAGCAGAAAA 33310 ||||| ||||| || ||||| || ||||| ||||| |||||||||||||||||| || Sbjct 140512 GCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGATAA 140453 Query 33311 TGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACG 33370 ||||||||| || || | |||||| || || |||||||| || || | |||||||| Sbjct 140452 TGTAAATAACTACTTGTTCAAAGGTAGTTTAGCGGGCGTTGACGGTCGCATTCAATCACG 140393 Query 33371 CAGTTATGAAAACAAAGACGGGCAACGTGTATTTGTCACAGAAGTAGTAGCGGACAGTGT 33430 || ||||||||| |||| || | ||||| ||||| || |||||||| || || || Sbjct 140392 TAGCTATGAAAACCAAGAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAGCGT 140333 Query 33431 TCAATTCTTAGAACCGAA 33448 ||||||| | ||||| || Sbjct 140332 TCAATTCCTTGAACCTAA 140315 Score = 172 bits (190), Expect = 2e-38 Identities = 406/608 (67%), Gaps = 23/608 (4%) Strand=Plus/Minus Query 28338 ATAATCTACTGTTTTTAATTTACTGATATCAAtttttttAGTACCTAATTTTTTGTCTTC 28397 ||||||||| || || | || | | || | ||||||||||||||||||| ||| | || Sbjct 2302911 ATAATCTACAGTATTAAGTTCATTAATCTTTATTTTTTTAGTACCTAATTCTTTCTTATC 2302852 Query 28398 ACTACCTTTTGTAGCGTGCAAAGTAACTTCATTGTCATTTTGGAGTTGGTAAGTTACAAG 28457 ||| |||||||||| | |||||| || ||| | || ||| | || |||| || | Sbjct 2302851 GCTATCTTTTGTAGCTTTCAAAGTTACATCACCATTATCTTGTAATTTATAAGCGACTAT 2302792 Query 28458 ACCTTTAGCGGTTCCGCCTTTTTTA-ATTTTATCGAAACTATGTTTGTTCCATTCTCCAA 28516 ||||| || || |||||||| |||||||| |||||| | ||| | | ||| Sbjct 2302791 TCCTTTGGCACTTTTTCCTTTTTTTGATTTTATCTTCTGAATGTTTATCCCAATTTTCAA 2302732 Query 28517 GTTTGCCAGTGTTTGGCGTAATATCCATTTCTAATTTATTAACGGTATCTTTACTATCTT 28576 | | || || ||||||||| | | || ||||| || | ||||||| | | || Sbjct 2302731 ATATACCTGTATTTGGCGTAGGTCCTAGTTTTAATTGCTTGATTGTATCTTGTTTTTTTT 2302672 Query 28577 GAGTAGCACTCATAGATGCAATCCAAACATTAGTTGA--AGTTATTTTGTCGTCATCAAC 28634 | | ||||| | | ||| ||||| |||| ||| |||| | || Sbjct 2302671 GTTCTACTTTCATATTAGATAACCATACATT--TTGAGCAGTAATTTCATTTGTATTTGT 2302614 Query 28635 TTTACTTTTAACCTCATATTTAAATGCGATAAGCTTCTTTTTACTCTTTTTGTTATCCTT 28694 ||| ||| ||| ||||||||||| || | || ||| | | | || ||| Sbjct 2302613 GTTATTTTCAACTTCATATTTAAAAGCTAAAAACTTGTCGCCAGTATTAA-GTT------ 2302561 Query 28695 ATCATTAATTAAAAATACATCTTTAATTTTTAAAACTGCTTGATCTAAAACTAATGTGTC 28754 |||||||||||||| ||||| ||||||||| || | ||| | | ||| ||||| Sbjct 2302560 --CATTAATTAAAAATGTGTCTTTGATTTTTAAAGCTACACCATCGATAGTTAAAGTGTC 2302503 Query 28755 GTTTTTAAATTGCGCTTTATTTTCATCTACAGA-AGTATTTGAGTCATTACTTTCT-TTT 28812 ||||||||||| | ||||| | | |||||||| | ||| | || | || || || Sbjct 2302502 ATTTTTAAATTGTGATTTATCTGCGTCTACAGATTCTTTTTTATTC--TCTTTACTATTG 2302445 Query 28813 TTGTTTCCATCACTACCACATGCGCCTAACACCAACGTACTTGCTAATAGTAAACCTAAT 28872 ||||| | || | |||||||| |||||||| || |||||||| |||| ||||||||| Sbjct 2302444 TTGTTACTAT---TTCCACATGCTCCTAACACTAATGTACTTGCCAATAATAAACCTAAA 2302388 Query 28873 AATCTTTTCATNNNNNNNNNNNNNNNNGTTTATATTTCCTTATATTTAAAAACTCTCAAT 28932 | ||||||| |||| |||| ||||||||||| || | ||| Sbjct 2302387 ACCTTTTTCATTTTACATACTCCTTTATTTTA-ATTT-TTTATATTTAAACACACGTAAT 2302330 Query 28933 GGCTCAAA 28940 |||||||| Sbjct 2302329 GGCTCAAA 2302322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138215298849732