Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_007065.1 Length=43440 Score E Sequences producing significant alignments: (Bits) Value seq89 212 2e-50 >seq89 Length=3091062 Score = 212 bits (234), Expect = 2e-50 Identities = 246/332 (74%), Gaps = 0/332 (0%) Strand=Plus/Minus Query 35114 AATGTTAAACAGAGTAGTTTTAGTAGGACGATTAACAAAAGACCCAGAATTAAGAAGTAC 35173 |||| |||| ||||| |||||||| || || ||||| ||||| ||||||| |||| || Sbjct 140632 AATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACAAC 140573 Query 35174 ACCAAATGGCGTAAATGTAGGGACATTCACATTAGCAGTAAACAGAACATTTACGAATGC 35233 ||| ||||| | ||| | ||| || || ||||||||||| | || ||||| ||||| Sbjct 140572 ACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAATGC 140513 Query 35234 TCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGTTCAAAAAACAAGCTGAAAA 35293 ||||| || || ||||||||||| || || || || || | ||||||||| || || Sbjct 140512 GCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGATAA 140453 Query 35294 CGTTAAAAACTACCTTTCTAAAGGATCGTTGGCAGGTGTAGACGGACGACTACAAACACG 35353 || || |||||| | | ||||| || || || || ||||| || | ||| |||| Sbjct 140452 TGTAAATAACTACTTGTTCAAAGGTAGTTTAGCGGGCGTTGACGGTCGCATTCAATCACG 140393 Query 35354 CAGTTACGATAACAAAGAAGGGCGACGTGTATTTGTGACAGAAGTAGTAGCGGACAGCGT 35413 || || || ||| ||||||| || ||||| ||||| || |||||||| || ||||| Sbjct 140392 TAGCTATGAAAACCAAGAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAGCGT 140333 Query 35414 TCAATTCTTAGAACCGAAGAATAACAACAAAC 35445 ||||||| | ||||| || ||| | ||| ||| Sbjct 140332 TCAATTCCTTGAACCTAAAAATCAAAACCAAC 140301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138884087715048