Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq46 122 8e-23 seq74 86.0 6e-12 >seq46 Length=4728336 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||| ||||||||||| || ||| | |||||| | ||| | ||| | Sbjct 1480600 AATGCAAATCTTTGTGAAAACATTAACAGGGAAAACAATCACCTTGGAAGTCGAACCTTC 1480541 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || || || | || ||| || ||| ||||||||||| || ||||| ||||| Sbjct 1480540 TGATACAATTGAAAACGTAAAAGCTAAAATTCAAGACAAAGAAGGTATCCCTCCAGATCA 1480481 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATA 26946 || ||| | |||| | |||||||||||| ||||||| | | | | | | | || || | Sbjct 1480480 GCAGAGATTGATTTTTGCCGGCAAACAACTTGAAGATGGTCGTA-CATTATCAGATTACA 1480422 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 | || ||||||||||| || |||| || || | || || |||||||| Sbjct 1480421 ATATCCAAAAAGAATCCACACTCCACCTTGTTTTAAGGCTCAGAGGAGG 1480373 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || ||||| ||| | ||||| ||||| | || || Sbjct 1480143 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAAACCATCACTCTCGAAGTCGAGCCATCA 1480084 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| || | || ||| || || || |||||||| || || || ||||| Sbjct 1480083 GATACCATTGAAAACGTAAAAGCCAAAATCCAAGATAAAGAAGGAATTCCCCCAGATCAG 1480024 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||||| ||||| | | |||||| ||||| ||||||| | | | || ||| || || Sbjct 1480023 CAAAGGCTCATCTTTGCCGGCAAGCAACTGGAAGATGGTCGTACACTCTCCGATTACAAT 1479964 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| |||||||||||| |||| || || |||||||| ||||||| Sbjct 1479963 ATTCAGAAAGAATCTACTCTCCACCTCGTACTGAGACTCCGAGGAGG 1479917 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || ||||| || ||||| || || | || || | ||| |||| | | Sbjct 1481739 ATGCAGATCTTCGTAAAGACTTTAACCGGCAAGACTATTACACTTGAAGTAGAGCCTTCC 1481680 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | ||||| |||||| || |||||||| || || || ||||| Sbjct 1481679 GACACTATTGAAAATGTCAAGGCAAAGATCCAAGATAAAGAAGGAATCCCCCCAGATCAG 1481620 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | |||| || || ||||| || ||||||| | ||| | | ||||||||| Sbjct 1481619 CAGAGGTTGATTTTCGCTGGAAAACAGCTTGAAGATGGTCGAACCCTTTCTGACTATAAC 1481560 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||||||| || |||| || || ||||| | |||||||| Sbjct 1481559 ATTCAAAAAGAATCAACCCTCCACCTTGTGTTGAGATTGAGAGGAGG 1481513 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| ||||| || || |||||| | ||||| | ||| | || | Sbjct 1481968 AATGCAGATCTTTGTGAAAACTTTGACCGGAAAAACCATCACATTGGAAGTTGAGCCTTC 1481909 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || || ||| | || || || || ||||||||||| || || || || || Sbjct 1481908 AGATACAATTGAGAATGTGAAGGCCAAAATCCAGGACAAAGAAGGTATCCCGCCAGACCA 1481849 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 |||||| || |||| || ||||| ||||| || |||| ||||| || || ||||| Sbjct 1481848 ACAAAGGCTGATTTTCGCTGGCAAGCAACTTGAGGATGGTAGAACTCTCTCGGATTATAA 1481789 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||| ||||| ||| | || ||||||| | || ||||| || Sbjct 1481788 CATTCAAAAGGAATCGACTCTGCACTTGGTCCTCCGTCTCAGAGGTGG 1481741 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| ||||| |||| ||||| | || || | ||| | || || Sbjct 1481283 ATGCAAATTTTTGTTAAAACTCTAACCGGAAAGACCATAACTTTAGAAGTCGAGCCATCA 1481224 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | |||||| || || ||||||||||| || || || || || Sbjct 1481223 GACACTATTGAAAATGTCAAAGCTAAAATACAAGACAAAGAAGGCATTCCCCCAGACCAG 1481164 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || |||| | ||| ||||||||||| |||| | | || || |||||| Sbjct 1481163 CAGAGGCTGATTTTTGCCGGAAAACAACTCGAGGATGGGCGTACGCTCTCAGATTATAAC 1481104 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| ||||| ||| | ||| |||| || || | |||||||| Sbjct 1481103 ATTCAAAAGGAATCGACTTTGCATTTGGTTCTCAGGTTGAGAGGAGG 1481057 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | |||||||| | |||||| | ||| | ||| || | Sbjct 1570257 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACCATCACCTTGGAAGTTGAACCATCC 1570316 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||| ||| | ||||| ||||| ||||| ||||| || || || || || Sbjct 1570317 GATACCATTGAGAATGTCAAGGCTAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 1570376 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || ||| | || | | || || || ||||| |||| | | | ||||| ||| Sbjct 1570377 CAGAGATTGATCTTTGCAGGAAAGCAGCTCGAGGATGGACGTACTCTTTCTGACTACAAC 1570436 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || ||||||||||| || |||| |||| || || ||||||||||| Sbjct 1570437 ATCCAAAAAGAATCAACCCTCCACTTGGTGCTTAGGCTTAGAGGAGG 1570483 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || ||||| || || || || ||| | ||||| | || | ||| || | Sbjct 1481055 ATGCAAATATTCGTAAAGACTTTGACAGGCAAAACCATCACTCTTGAGGTCGAACCATCC 1480996 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || || |||||| || |||||||| || || || |||||| Sbjct 1480995 GACACAATTGAAAATGTTAAGGCCAAGATTCAGGATAAAGAAGGCATCCCACCAGATCAA 1480936 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | || | || || ||||| | ||||||| | | | ||||| || Sbjct 1480935 CAGAGGTTAATCTTCGCTGGAAAACAGTTGGAAGATGGACGCACTCTTTCGGACTACAAT 1480876 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||||||| || | || || || |||| || |||||||| Sbjct 1480875 ATTCAAAAAGAATCCACCCTTCACCTCGTTTTGAGGCTGAGAGGAGG 1480829 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 |||||||| | || || || || | |||||||| | ||||| | ||| | || || Sbjct 1570026 AAAATGCAGATCTTCGTGAAGACTCTTACTGGAAAGACAATCACTTTGGAAGTTGAGCCA 1570085 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 |||||||| || | |||||| || || ||||| ||||| || || || || Sbjct 1570086 TCGGACACCATTGACAATGTCAAAGCTAAAATCCAAGACAAGGAAGGAATTCCCCCAGAC 1570145 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 || || ||| | || | || ||| || || ||||| |||| | | | | ||||| Sbjct 1570146 CAGCAGAGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGTACGCTTTCTGACTAC 1570205 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||||||||||| || |||| || || |||| | |||||||| Sbjct 1570206 AACATCCAAAAAGAATCCACCCTCCACCTTGTTTTGAGGTTGAGAGGAGG 1570255 >seq74 Length=3691182 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCAC 71731 ||||||||||| ||||||||| | |||||| ||| || | ||| || ||||| ||| Sbjct 1881519 ACGCATGATGATCTATGGAATTCGGCTCAGATCCAGTTAAATACTGAAGGAAAAATGCAC 1881578 Query 71732 GGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAG 71791 || | ||| | ||||| ||||| ||||| || ||||| ||||| || | ||| || | Sbjct 1881579 GGTTTCCTGAGGATGTATTGGGCGAAAAAAATACTCGAATGGACCCAGAGTCCTGAAGAT 1881638 Query 71792 GCGCT-CGAGTATTCTATTTATCTAAACGATAGATACAG 71829 || || |||| | || |||| | ||||| | ||||| Sbjct 1881639 GCTCTGAGAGT-TGCTCTTTACTTGAACGACAAGTACAG 1881676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478654011441440