Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_007458.1 Length=37253 Score E Sequences producing significant alignments: (Bits) Value seq89 134 3e-27 >seq89 Length=3091062 Score = 134 bits (148), Expect = 3e-27 Identities = 258/375 (69%), Gaps = 9/375 (2%) Strand=Plus/Plus Query 32004 TTATATGTAAAAAGTCATATGTTTTTTATCTTCTTTATAGTACTCTAACCGGTTTTGCAA 32063 |||||| ||||| |||||||| ||| |||||| |||| || | ||| | | ||| || Sbjct 2717169 TTATATATAAAATTTCATATGTGGTTTTTCTTCTATATAATAGTTTAATCTATCTTGTAA 2717228 Query 32064 AGTGCCAGTGTGGAACTCAAACTTATGGCCATCTGGATCTGTAAAGTAAAGAGATCTTTG 32123 || ||||| || || || ||||| ||||| |||||||| || ||||| | ||| || Sbjct 2717229 TGTACCAGTATGTAATTCTAACTTGTGGCCGTCTGGATCAGTGAAGTATATTGATTGTTT 2717288 Query 32124 GTCTCTCTCATCTCTTTCTCGGCCAGGTAAAATATTAACATCATTTTGAATTAATACTTC 32183 ||||| ||||||| | || || ||| ||||| ||||| || | |||| || Sbjct 2717289 ATCTCTTACATCTCTATTACGCCCTTCTAATATATTCACATCGTTATCTTTTAACCATTG 2717348 Query 32184 TTTTAAATGGTCTAATGC---TTCATTAGTTACAGTGAAAGCCATATGTGTATAAGATTG 32240 | | | || ||| | ||||| | || || || |||||||||||||| || | Sbjct 2717349 ATACCATTCATCAAATTCACTTTCATCAATT---GTAAATGCCATATGTGTATATGAGTA 2717405 Query 32241 CTTAATTTCATTTCTTGGTATATCTTCTTCAACATTTAAAGCAATCCATAATCCATTTAA 32300 | |||||||||||| |||||||| | ||| |||| | || | ||| | ||| ||| Sbjct 2717406 TTGAATTTCATTTCTAGGTATATCCTTTTCTTCATTAAGCGCTAGCCACAGACCACCTAA 2717465 Query 32301 ATCAAAATACGCTAATTTTCT-ACCTTTTACTAATAATTTTGCTTGAAGTAtttttttGA 32359 || || || |||||| | || || ||||| | || |||| | || | ||| | Sbjct 2717466 TGTGAAGTAAGC-AATTTTATCACTTTCTACTAGAATATTAGCTTTTAAAATATCTTT-A 2717523 Query 32360 TAGAATTCAATAGAT 32374 ||||| || ||||| Sbjct 2717524 TAGAAAGCAGTAGAT 2717538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119086017333660