Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq46 98.7 8e-16 >seq46 Length=4728336 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| || | || |||| ||||| || || |||||||| ||||| || || | Sbjct 1481740 CCCACCTCTGAGACGGAGGACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCCGA 1481799 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | | ||||| | ||| ||||| || |||| |||| |||||||| || Sbjct 1481800 GAGAGTTCTACCATCCTCAAGTTGCTTGCCAGCGAAAATCAGCCTTTGTTGGTCTGGCGG 1481859 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | || |||||||| |||| |||||| | | | || || ||||| Sbjct 1481860 GATACCTTCTTTGTCCTGGATTTTGGCCTTCACATTCTCAATTGTATCTGAAGGCTCAAC 1481919 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||| ||||||||||||||||||| ||||| ||||| ||||||||| Sbjct 1481920 TTCCAATGTGATGGTTTTTCCGGTCAAAGTTTTCACAAAGATCTGCATT 1481968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405081078311980