Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_008515.1 Length=165890 Score E Sequences producing significant alignments: (Bits) Value seq89 98.7 1e-15 >seq89 Length=3091062 Score = 98.7 bits (108), Expect = 1e-15 Identities = 191/281 (68%), Gaps = 1/281 (0%) Strand=Plus/Minus Query 41398 AATATCAGGATACATCCTTTTGCTTGCACACTCTAGAGCAAGCTGCTTAATATCATAGTT 41457 ||||||||||||||| ||||| | | ||||||| || | || || |||||||| || Sbjct 556795 AATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATT 556736 Query 41458 CGGATCGTCTTTATAAAGATTAACGCCTTCTTCAACGAACATAACAAGTTTAGGAAAAAT 41517 |||||| | | || ||| ||||||| || || | | |||||||| || || || Sbjct 556735 CGGATCTTTCGAACTAAAATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGAT 556676 Query 41518 AGGAGTTATCCCATCACGACCAAGACCTTTAATACGATTTTTCAAAATTGCTTTCTGAAT 41577 | ||| || | ||| ||| | |||||| || | | | || | |||||||| || || Sbjct 556675 GGCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTGGAT 556616 Query 41578 CATTCGTTCAGTCCAGTCAGTTCCCGTACCAAATGTAATTGTTACAAAAGGAGTCTGTCC 41637 | || | || ||||| |||||| | |||||||||||| || || || Sbjct 556615 TTTACGGCTATATGTATCTGTTCCTAATCCAAATCCTAATGTTACAAAAGGTGTTTGACC 556556 Query 41638 GTTTGAACTAAAGAGAGTATTTACTTCATATTCATAAGCTT 41678 ||||| || | | || || | ||||||||| ||| ||| Sbjct 556555 ATTTGATGTATACAATGTGTTAATTTCATATTC-TAAACTT 556516 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 140651 TGCAATGTTGAATGGCAAGCCCAAGAACACGTCAACACTTCTTTGATACCACTGTAAATC 140710 ||||||||| ||||||| || ||||| | ||| ||||||| ||||| | || || Sbjct 2013384 TGCAATGTTAAATGGCACACCTAAGAATATATCAGCACTTCTCTGATATAATTGGCAACT 2013325 Query 140711 CAAATAGCCATTACGCACATTAAATTGATAGAACATATGACAAGGCGGTAATGCCATATA 140770 ||| | |||| | |||| |||||| | | | |||| || || ||||| ||||| Sbjct 2013324 CAATTTTCCATCTTGAACATAAAATTGGAACATCGTATGGCATGGTGGTAAAGCCATTGT 2013265 Query 140771 TTTAAGTTCAGCTGGATTCCACGCAGAAACAATTTGTCGCCTATCATTCGGCAGTTTTTT 140830 | || ||||| ||||||||||||||||| || |||| | | ||| || ||||| Sbjct 2013264 ATCAATTTCAGTTGGATTCCACGCAGAAATGATATGTCTACGAGAATTAGGGTTATTTTT 2013205 Query 140831 AATACGATCAATAACT 140846 ||| ||| ||| ||| Sbjct 2013204 AATTTGATTAATTACT 2013189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530710699132000