Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq46 149 5e-31 seq12 86.0 5e-12 seq69 82.4 6e-11 >seq46 Length=4728336 Score = 149 bits (164), Expect = 5e-31 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| ||||||||||| || || ||| ||||||||||||| ||| | | Sbjct 1480827 ATGCAAATCTTTGTGAAAACTTTAACAGGAAAGACGATCACTCTTGAAGTCGAACCATCG 1480768 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || ||||| |||||||| || || || ||||| ||||| || || Sbjct 1480767 GATACGATTGAAAATGTCAAAGCGAAAATTCAGGATAAAGAAGGTATCCCACCAGACCAG 1480708 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || |||||||| || |||||||| ||| ||||| | || ||||| ||| Sbjct 1480707 CAGAGGCTCATCTTTGCCGGTAAGCAGTTAGAAGATGGGCGCACTCTTTCTGATTATAAC 1480648 Query 22399 ATTCAAAAAGAATCCAC 22415 || || ||||||||||| Sbjct 1480647 ATCCAGAAAGAATCCAC 1480631 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||||||||||||||||||| ||||||| || || | ||| | ||||| || | | Sbjct 1481284 GATGCAAATTTTTGTTAAAACTCTAACCGGAAAGACCATAACTTTAGAAGTCGAGCCATC 1481225 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | || || ||||| ||||| |||||||| || || ||||| || || || Sbjct 1481224 AGACACTATTGAAAATGTCAAAGCTAAAATACAAGACAAAGAAGGCATTCCCCCAGACCA 1481165 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || |||||||| ||||| | |||||| || || |||| ||||| || Sbjct 1481164 GCAGAGGCTGATTTTTGCCGGAAAACAACTCGAGGATGGGCGTACGCTCTCAGATTATAA 1481105 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||| ||||| || | ||||| ||| | | ||| | |||||| Sbjct 1481104 CATTCAAAAGGAATCGACTTTGCATTTGGTTCTCAGGTTGAGAGGAGGT 1481056 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||||||||| ||||| |||||||| | ||| | ||||| ||| | | Sbjct 1463882 ATGCAAATCTTTGTTAAAACCTTAACTGGTAAAACAATTACTTTGGAAGTAGAACCATCT 1463823 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| || || || || || || |||||||| || ||||| Sbjct 1463822 GACACAATTGAAAATGTGAAAGCTAAGATCCAGGATAAAGAAGGTATTCCTCCAGATCAG 1463763 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | ||||| |||||||| ||||| | || ||| || || | ||||| |||||| Sbjct 1463762 CAAAGGCTTATCTTTGCCGGTAAACAACTTGAAGATGGTCGAACTCTTTCCGACTACAAC 1463703 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| |||||||| || Sbjct 1463702 ATTCAGAAAGAATCGAC 1463686 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||||| || || ||||| |||||||||| || ||| | || Sbjct 1481055 ATGCAAATATTCGTAAAGACTTTGACAGGCAAAACCATCACTCTTGAGGTCGAACCATCC 1480996 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || ||||| || || || || || ||||| |||||| Sbjct 1480995 GACACAATTGAAAATGTTAAGGCCAAGATTCAGGATAAAGAAGGCATCCCACCAGATCAA 1480936 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || || || || |||||||| || ||| ||||| | || || ||||| Sbjct 1480935 CAGAGGTTAATCTTCGCTGGAAAACAGTTGGAAGATGGACGCACTCTTTCGGACTACAAT 1480876 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||||||||||||| | || | |||||| | || | |||||| Sbjct 1480875 ATTCAAAAAGAATCCACCCTTCACCTCGTTTTGAGGCTGAGAGGAGGT 1480828 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| ||||| ||||| || ||||| |||| | ||||| ||| | | Sbjct 1480599 ATGCAAATCTTTGTGAAAACATTAACAGGGAAAACAATCACCTTGGAAGTCGAACCTTCT 1480540 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | ||| |||||||||||||| || ||||| || || ||||| Sbjct 1480539 GATACAATTGAAAACGTAAAAGCTAAAATTCAAGACAAAGAAGGTATCCCTCCAGATCAG 1480480 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || |||||||||||||| | || ||| || || | || |||||||| Sbjct 1480479 CAGAGATTGATTTTTGCCGGCAAACAACTTGAAGATGGTCGTACATTATCAGATTACAAT 1480420 Query 22399 ATTCAAAAAGAATCCAC 22415 || |||||||||||||| Sbjct 1480419 ATCCAAAAAGAATCCAC 1480403 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 || ||||| || || || || ||| | || || || || ||||| | ||||| || | Sbjct 1570026 AAAATGCAGATCTTCGTGAAGACTCTTACTGGAAAGACAATCACTTTGGAAGTTGAGCCA 1570085 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || ||| | ||| || ||||| ||||| ||||||||||| || ||||| || || Sbjct 1570086 TCGGACACCATTGACAATGTCAAAGCTAAAATCCAAGACAAGGAAGGAATTCCCCCAGAC 1570145 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || | | || || ||||| || ||| | |||||| || || | || || ||| Sbjct 1570146 CAGCAGAGATTGATCTTCGCCGGAAAGCAGCTCGAGGATGGTCGTACGCTTTCTGACTAC 1570205 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| ||||||||||||||| | || | |||||| | ||| | |||||| Sbjct 1570206 AACATCCAAAAAGAATCCACCCTCCACCTTGTTTTGAGGTTGAGAGGAGGT 1570256 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||||| || || ||||| ||||||| ||||| || | | Sbjct 1480143 ATGCAGATCTTCGTCAAGACTTTGACTGGCAAAACCATCACTCTCGAAGTCGAGCCATCA 1480084 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | ||| ||||| ||||| || || || ||||| || ||||| Sbjct 1480083 GATACCATTGAAAACGTAAAAGCCAAAATCCAAGATAAAGAAGGAATTCCCCCAGATCAG 1480024 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | || || ||||||||||| || | || ||| || || ||||||||||||| Sbjct 1480023 CAAAGGCTCATCTTTGCCGGCAAGCAACTGGAAGATGGTCGTACACTCTCCGATTACAAT 1479964 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| |||||||| || Sbjct 1479963 ATTCAGAAAGAATCTAC 1479947 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || ||||| | ||||| || | | Sbjct 1481511 ATGCAGATCTTCGTGAAGACTCTTACAGGAAAGACCATCACTTTGGAAGTCGAGCCTTCT 1481452 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| || |||||||| || ||||||||||| || ||||| Sbjct 1481451 GATACAATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGTATTCCTCCAGATCAG 1481392 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || || || | || || ||| || | |||||||| ||| Sbjct 1481391 CAGAGGTTGATTTTTGCAGGAAAGCAACTTGAAGACGGCCGAACACTTTCCGATTATAAC 1481332 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| |||||||| ||| | ||| | || ||| ||||||| ||||| Sbjct 1481331 ATTCAGAAAGAATCTACCCTCCATCTTGTATTGAGATTGCGAGGAGG 1481285 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || ||||||||||| || || | || |||||||| || | | Sbjct 1481740 GATGCAGATCTTCGTAAAGACTTTAACCGGCAAGACTATTACACTTGAAGTAGAGCCTTC 1481681 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||| || | || || |||| ||| || ||||| || || || || || || ||||| Sbjct 1481680 CGACACTATTGAAAATGTCAAGGCAAAGATCCAAGATAAAGAAGGAATCCCCCCAGATCA 1481621 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | | || || || || |||||| | || ||| || ||| | || || || || Sbjct 1481620 GCAGAGGTTGATTTTCGCTGGAAAACAGCTTGAAGATGGTCGAACCCTTTCTGACTATAA 1481561 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||||||||||||| ||| | || | || ||| ||||| | ||||| Sbjct 1481560 CATTCAAAAAGAATCAACCCTCCACCTTGTGTTGAGATTGAGAGGAGG 1481513 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| ||||||||||| || || || |||| || ||||| || | | Sbjct 1480371 ATGCAAATCTTTGTGAAAACTTTAACAGGAAAGACAATCACCCTCGAAGTCGAGCCATCT 1480312 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || ||||| || ||||| || ||||| || || || || || || Sbjct 1480311 GACACCATTGATAATGTCAAAGCTAAGATTCAGGATAAGGAAGGGATCCCTCCAGACCAG 1480252 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || || || || || || ||||| | || ||||||||| Sbjct 1480251 CAGAGGTTAATTTTTGCTGGAAAGCAATTGGAAGACGGACGCACACTTTCGGATTACAAC 1480192 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTG 22431 || || ||||||||||| | ||| | || ||| Sbjct 1480191 ATCCAGAAAGAATCCACTCTTCATCTTGTCTTG 1480159 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| |||||||| ||||| ||||| |||| | ||||| || | | Sbjct 1481967 ATGCAGATCTTTGTGAAAACTTTGACCGGAAAAACCATCACATTGGAAGTTGAGCCTTCA 1481908 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | || ||||| || ||||| || ||||| || || || ||| Sbjct 1481907 GATACAATTGAGAATGTGAAGGCCAAAATCCAGGACAAAGAAGGTATCCCGCCAGACCAA 1481848 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||| | || || || || ||||| || | |||||| | || |||| ||||| ||| Sbjct 1481847 CAAAGGCTGATTTTCGCTGGCAAGCAACTTGAGGATGGTAGAACTCTCTCGGATTATAAC 1481788 Query 22399 ATTCAAAAAGAATCCAC 22415 |||||||| ||||| || Sbjct 1481787 ATTCAAAAGGAATCGAC 1481771 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||||||||||||||| ||||| |||||||| |||| | ||||| ||| | | Sbjct 1463654 ATGCAAATTTTTGTTAAAACCTTAACTGGTAAAACAATCACCTTGGAAGTAGAACCATCT 1463595 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | ||| || |||||||| || ||||||||||| || ||||| Sbjct 1463594 GACACAATTGAAAATGTTAAAGCTAAGATTCAAGATAAAGAGGGTATTCCTCCAGATCAG 1463535 Query 22339 CAACGTCTTATATTTGCCGGCAAACA 22364 || | | || ||||| || || || Sbjct 1463534 CAGAGGTTGATTTTTGCAGGAAAGCA 1463509 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| | ||||| ||| | || Sbjct 1570257 ATGCAGATCTTCGTGAAGACCCTTACTGGAAAGACCATCACCTTGGAAGTTGAACCATCC 1570316 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || || |||| || || ||||||||||| || ||||| || || || Sbjct 1570317 GATACCATTGAGAATGTCAAGGCTAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 1570376 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | | || ||||| || || ||| | |||||| || || | || || |||||| Sbjct 1570377 CAGAGATTGATCTTTGCAGGAAAGCAGCTCGAGGATGGACGTACTCTTTCTGACTACAAC 1570436 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || ||||||||||| ||| | || || || Sbjct 1570437 ATCCAAAAAGAATCAACCCTCCACTTGGT 1570465 >seq12 Length=11555272 Score = 86.0 bits (94), Expect = 5e-12 Identities = 159/233 (68%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 22214 TAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAA 22273 ||||||||||| | ||||| ||||| | || || | | || | |||| || |||| Sbjct 5006293 TAAAGATGCAAGTCTTTGTAAAAACCCTCACGGGCACCA---TCGCCGTTGAGGTTGAAA 5006349 Query 22274 CCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCG 22333 |||||||| || || | | || ||| ||| ||| || || || || | Sbjct 5006350 GTACCGATACTGTTGAAAAACTAAAGCAAGCGATTGAAGTGAAAGAATCCATCAAGCCTG 5006409 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 | ||||| |||||||| | || ||||||||||| ||| || | ||| || | ||| Sbjct 5006410 ACCAACAGCGTCTTATTTATGGAGGCAAACAGTTGGAGAATGGCAACACGCTCGCTCATT 5006469 Query 22394 ACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||| || || |||||||||||||| || |||| || || | | |||||| Sbjct 5006470 ACAATATCCAGAAAGAATCCACCATCCACCTAGTCTTTAGACTTCTTGGAGGT 5006522 >seq69 Length=2547145 Score = 82.4 bits (90), Expect = 6e-11 Identities = 134/193 (69%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| |||||||| || || |||| || || || |||| ||||| || || Sbjct 1551696 AAGATGCAGATTTTTGTGAAGACCCTAACGGGCAAGACAATCACCCTTGAGGTCGAGCAG 1551637 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | || || ||||| || || ||||| ||||||||||| ||||| || Sbjct 1551636 TCTGACACAATTGAAAATGTCAAAGCCAAGATCCAAGATAAGGAGGGTATCCCACCGGAC 1551577 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| | | || || ||||| || ||| | || || | | || | || || ||| Sbjct 1551576 CAACAGAGGTTGATTTTCGCCGGGAAGCAGCTCGAAGACGGCAGGACTCTTTCGGACTAC 1551517 Query 22396 AACATTCAAAAAG 22408 ||||| || |||| Sbjct 1551516 AACATCCAGAAAG 1551504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419720828160130