Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq46 188 1e-42 seq69 140 6e-28 >seq46 Length=4728336 Score = 188 bits (208), Expect = 1e-42 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | ||| | | |||||||| || || || |||||||||||||| || || || Sbjct 1570483 CCTCCTCTAAGCCTAAGCACCAAGTGGAGGGTTGATTCTTTTTGGATGTTGTAGTCAGAA 1570424 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || | ||| || ||||| || ||| Sbjct 1570423 AGAGTACGTCCATCCTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGA 1570364 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||||||||| ||||| |||||||| ||| ||||| || | || ||| ||| Sbjct 1570363 ATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTCTCAATGGTATCGGATGGTTCAACT 1570304 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| ||||| || |||||||| ||||| |||||||| Sbjct 1570303 TCCAAGGTGATGGTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 1570257 Score = 170 bits (188), Expect = 4e-37 Identities = 166/214 (78%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || | ||| || ||||| |||||||||||||| || || || || || | ||||| Sbjct 1570241 CAAAACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGCGTACGACCATC 1570182 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 || | |||||| |||||||| || | ||| || ||||| || ||||| ||||||||||| Sbjct 1570181 CTCGAGCTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTC 1570122 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || || ||||| || |||||||| | || || |||||||| ||||| || Sbjct 1570121 TTGGATTTTAGCTTTGACATTGTCAATGGTGTCCGATGGCTCAACTTCCAAAGTGATTGT 1570062 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||| || || ||||| ||||| ||||||||| Sbjct 1570061 CTTTCCAGTAAGAGTCTTCACGAAGATCTGCATT 1570028 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || | || ||| | ||| || || || ||||| || || || ||||||||| Sbjct 1479917 CCTCCTCGGAGTCTCAGTACGAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCGGAG 1479976 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | |||||||| | ||||| ||||| || ||||| ||||| || || || ||| Sbjct 1479977 AGTGTACGACCATCTTCCAGTTGCTTGCCGGCAAAGATGAGCCTTTGCTGATCTGGGGGA 1480036 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| || ||||| || || || || ||| || ||||| |||| || || ||| Sbjct 1480037 ATTCCTTCTTTATCTTGGATTTTGGCTTTTACGTTTTCAATGGTATCTGATGGCTCGACT 1480096 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||||| || || | ||||||||||| |||||||| Sbjct 1480097 TCGAGAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 1480143 Score = 158 bits (174), Expect = 2e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || || || || ||||| ||||||||||| ||||| || || ||||| || Sbjct 1481759 ACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCCGAGAGAGTTCTACCATCCTCA 1481818 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||||| || ||||| || || ||||||||||| || || || ||||| ||||| || Sbjct 1481819 AGTTGCTTGCCAGCGAAAATCAGCCTTTGTTGGTCTGGCGGGATACCTTCTTTGTCCTGG 1481878 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || ||||| || ||| || || |||| | || |||||||| |||||||||||| Sbjct 1481879 ATTTTGGCCTTCACATTCTCAATTGTATCTGAAGGCTCAACTTCCAATGTGATGGTTTTT 1481938 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || | || || || || ||||||||| Sbjct 1481939 CCGGTCAAAGTTTTCACAAAGATCTGCATT 1481968 Score = 147 bits (162), Expect = 4e-30 Identities = 158/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || ||||| ||||| |||||||||||||| || || || | ||||||||||| Sbjct 1480620 CAAGATGAAGAGTGGATTCTTTCTGGATGTTATAATCAGAAAGAGTGCGCCCATCTTCTA 1480679 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 ||||||| ||||| || ||||| || || ||||| ||||| || ||||| || || |||| Sbjct 1480680 ACTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCTTCTTTATCCTGAA 1480739 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | || || ||||| || || || || | || ||| ||||| | ||||| || |||| Sbjct 1480740 TTTTCGCTTTGACATTTTCAATCGTATCCGATGGTTCGACTTCAAGAGTGATCGTCTTTC 1480799 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | || || || || || ||||| Sbjct 1480800 CTGTTAAAGTTTTCACAAAGATTTGCAT 1480827 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || | ||| || | ||| || ||||| |||||||| || || || || || Sbjct 1480829 CCTCCTCTCAGCCTCAAAACGAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCCGAA 1480888 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| ||||| || || ||||| || | || ||||| || ||||| Sbjct 1480889 AGAGTGCGTCCATCTTCCAACTGTTTTCCAGCGAAGATTAACCTCTGTTGATCTGGTGGG 1480948 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||| || || |||||||| ||||| || || || ||||| | || ||| || Sbjct 1480949 ATGCCTTCTTTATCCTGAATCTTGGCCTTAACATTTTCAATTGTGTCGGATGGTTCGACC 1481008 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||||| || || | ||||| |||||||| ||||| Sbjct 1481009 TCAAGAGTGATGGTTTTGCCTGTCAAAGTCTTTACGAATATTTGCAT 1481055 Score = 138 bits (152), Expect = 2e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || | || || || ||||| ||||||||||| ||||| || | |||||| || Sbjct 1481075 ACCAAATGCAAAGTCGATTCCTTTTGAATGTTATAATCTGAGAGCGTACGCCCATCCTCG 1481134 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | || || ||||| || || || || || ||||| || ||||||||||| |||||||| Sbjct 1481135 AGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGT 1481194 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || || ||||| || || ||||||| || || ||||| || || ||||| ||| Sbjct 1481195 ATTTTAGCTTTGACATTTTCAATAGTGTCTGATGGCTCGACTTCTAAAGTTATGGTCTTT 1481254 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || || || || || ||||| Sbjct 1481255 CCGGTTAGAGTTTTAACAAAAATTTGCAT 1481283 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || | | |||||| | || || || || ||||| || |||||||||||||| Sbjct 1481285 CCTCCTCGCAATCTCAATACAAGATGGAGGGTAGATTCTTTCTGAATGTTATAATCGGAA 1481344 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | || ||||| | ||||| || || || || | || || || || || ||| Sbjct 1481345 AGTGTTCGGCCGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGA 1481404 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || || ||||||||||| || || || || || || || | | || ||| Sbjct 1481405 ATACCCTCTTTATCTTGAATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGCTCGACT 1481464 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| ||||| || || ||||| ||||| |||||||| Sbjct 1481465 TCCAAAGTGATGGTCTTTCCTGTAAGAGTCTTCACGAAGATCTGCAT 1481511 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || | || | ||| || | ||| || || || ||||| || ||||| || |||| Sbjct 1463654 TTCCACCTCTGAGCCTCAAGACAAGGTGAAGTGTCGATTCTTTCTGAATGTTGTAGTCGG 1463713 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | |||||||| | || || ||||| || || || ||||| || || || | Sbjct 1463714 AAAGAGTTCGACCATCTTCAAGTTGTTTACCGGCAAAGATAAGCCTTTGCTGATCTGGAG 1463773 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| ||||| || || || ||||| || || || || || ||||| | || ||||| Sbjct 1463774 GAATACCTTCTTTATCCTGGATCTTAGCTTTCACATTTTCAATTGTGTCAGATGGTTCTA 1463833 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||||| || || ||||| || || | ||| || || || || |||||| Sbjct 1463834 CTTCCAAAGTAATTGTTTTACCAGTTAAGGTTTTAACAAAGATTTGCATT 1463883 Score = 127 bits (140), Expect = 4e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || | ||| || ||||| ||||||||||| || ||||| || | ||| | |||||| Sbjct 1480388 AAAACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAATCTGATAATGTACGACCATCT 1480447 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || | || || ||||| || || | ||| || || || || || || ||||| |||||| Sbjct 1480448 TCAAGTTGTTTGCCGGCAAAAATCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCT 1480507 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 ||||| || || || ||| || || || || | | ||| |||||||||||||| ||| Sbjct 1480508 TGAATTTTAGCTTTTACGTTTTCAATTGTATCAGAAGGTTCGACTTCCAAGGTGATTGTT 1480567 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || | || || || || || |||||| Sbjct 1480568 TTCCCTGTTAATGTTTTCACAAAGATTTGCATT 1480600 Score = 123 bits (136), Expect = 5e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || | ||| || || || |||||||| |||||||| || || || || | ||||| Sbjct 1481527 CAACACAAGGTGGAGGGTTGATTCTTTTTGAATGTTATAGTCAGAAAGGGTTCGACCATC 1481586 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| | ||| || || ||||| || | || || || || || || || ||||| || || Sbjct 1481587 TTCAAGCTGTTTTCCAGCGAAAATCAACCTCTGCTGATCTGGGGGGATTCCTTCTTTATC 1481646 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| |||||||||||||| || || ||||| | | |||||||| | || || || Sbjct 1481647 TTGGATCTTTGCCTTGACATTTTCAATAGTGTCGGAAGGCTCTACTTCAAGTGTAATAGT 1481706 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||| ||||| |||||||| Sbjct 1481707 CTTGCCGGTTAAAGTCTTTACGAAGATCTGCAT 1481739 Score = 111 bits (122), Expect = 3e-19 Identities = 135/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || | || | ||| || | || || || || ||||| || ||||||||||| | Sbjct 1463882 TTCCGCCTCTGAGCCTCAAGACAAGATGAAGTGTTGATTCTTTCTGAATGTTATAATCCG 1463941 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | |||||||| ||||| || |||||||| || | || ||||| || |||| Sbjct 1463942 AAAGAGTGCGTCCATCTTCCAACTGTTTTCCGGCGAAGATTAACCTCTGTTGATCTGGTG 1464001 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | |||||||| || || |||||||| ||||| || || || ||||| | || ||| | Sbjct 1464002 GGATGCCTTCTTTATCCTGAATCTTGGCCTTAACATTTTCAATTGTGTCGGATGGTTCGA 1464061 Query 68413 CTTC 68416 | || Sbjct 1464062 CCTC 1464065 Score = 98.7 bits (108), Expect = 2e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 || ||||| | ||||| || || || || | || || || || || ||||| || || Sbjct 1463497 CCGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGAATACCCTCT 1463556 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 || ||||||||||| || || || || || ||||| | || |||||||||||||||| Sbjct 1463557 TTATCTTGAATCTTAGCTTTAACATTTTCAATTGTGTCAGATGGTTCTACTTCCAAGGTG 1463616 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||| || || | ||| || || || || |||||| Sbjct 1463617 ATTGTTTTACCAGTTAAGGTTTTAACAAAAATTTGCATT 1463655 >seq69 Length=2547145 Score = 140 bits (154), Expect = 6e-28 Identities = 147/191 (77%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 68272 CTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATA 68331 |||| |||||||| || || || || ||||| || ||||| | ||||||||||||||| | Sbjct 1551504 CTTTCTGGATGTTGTAGTCCGAAAGAGTCCTGCCGTCTTCGAGCTGCTTCCCGGCGAAAA 1551563 Query 68332 TGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCT 68391 | | || |||||||| ||||| || || ||||| ||||| ||||| || ||||| | Sbjct 1551564 TCAACCTCTGTTGGTCCGGTGGGATACCCTCCTTATCTTGGATCTTGGCTTTGACATTTT 1551623 Query 68392 CGATGGTGTCTG-CTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACG 68450 | || ||||| | ||| || || || | |||||| || || ||||| |||||||| || Sbjct 1551624 CAATTGTGTCAGACTG-CTCGACCTCAAGGGTGATTGTCTTGCCCGTTAGGGTCTTCACA 1551682 Query 68451 AATATCTGCAT 68461 || |||||||| Sbjct 1551683 AAAATCTGCAT 1551693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921606248567440