Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq46 118 9e-22 seq12 82.4 6e-11 >seq46 Length=4728336 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || |||||||| | || | || |||||||||||||| ||||| || Sbjct 1480826 ATACCTCCTCTCAGCCTCAAAACGAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCC 1480885 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || |||||| | ||||| |||||| |||| | | |||||| || || Sbjct 1480886 GAAAGAGTGCGTCCATCTTCCAACTGTTTTCCAGCGAAGATTAACCTCTGTTGATCTGGT 1480945 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||||||||| || |||||| || | | ||||| ||||||| | |||| Sbjct 1480946 GGGATGCCTTCTTTATCCTGAATCTTGGCCTTAACATTTTCAATTGTGTCGGATGGTTCG 1481005 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | |||||||| |||| ||| ||||| || || ||||| Sbjct 1481006 ACCTCAAGAGTGATGGTTTTGCCTGTCAAAGTCTTTACGAATATTTGCAT 1481055 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC- 114211 ||||| || | || || ||||| | || | || ||||||||||| || |||||||| Sbjct 1480370 ATACCTCCTCTGAGCCTTAAAACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAATCT 1480429 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 | | || |||||| ||||||||||||||| || || | || | | ||| || || || Sbjct 1480430 GATAAT-GTACGACCATCTTCAAGTTGTTTGCCGGCAAAAATCAATCTCTGCTGATCTGG 1480488 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 ||| || ||||||||||| ||| || ||||| | ||||| || || | | ||| Sbjct 1480489 AGGGATACCTTCTTTGTCTTGAATTTTAGCTTTTACGTTTTCAATTGTATCAGAAGGTTC 1480548 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| |||| ||| | ||||| || || | ||||| ||||| || ||||| Sbjct 1480549 GACTTCCAAGGTGATTGTTTTCCCTGTTAATGTTTTCACAAAGATTTGCAT 1480599 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || ||||| || | || | || |||||||| ||||||||||| ||| | ||| ||| Sbjct 1463665 AGCCTCAAGACAAGGTGAAGTGTCGATTCTTTCTGAATGTTGTAGTCGGAAAGAGTTCGA 1463724 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 |||||||||||||||||| || |||| || | || || || |||||||| |||||| Sbjct 1463725 CCATCTTCAAGTTGTTTACCGGCAAAGATAAGCCTTTGCTGATCTGGAGGAATACCTTCT 1463784 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 || || ||||| ||| | | ||||| ||||| | | ||| || |||| || Sbjct 1463785 TTATCCTGGATCTTAGCTTTCACATTTTCAATTGTGTCAGATGGTTCTACTTCCAAAGTA 1463844 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| || || | ||||| ||||| || ||||| Sbjct 1463845 ATTGTTTTACCAGTTAAGGTTTTAACAAAGATTTGCAT 1463882 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || || ||||||| || | || | ||||||||||| ||||| ||||||||| Sbjct 1479917 CCTCCTCGGAGTCTCAGTACGAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCGGAG 1479976 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | |||||| |||||| ||||| || || || ||||||| | || || || || ||| Sbjct 1479977 AGTGTACGACCATCTTCCAGTTGCTTGCCGGCAAAGATGAGCCTTTGCTGATCTGGGGGA 1480036 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || |||||||| || || || ||||| | ||||| ||| || | | ||||| Sbjct 1480037 ATTCCTTCTTTATCTTGGATTTTGGCTTTTACGTTTTCAATGGTATCTGATGGCTCGACT 1480096 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | || | |||||||| |||| ||| || || || ||||||||| Sbjct 1480097 TCGAGAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATCTGCATG 1480144 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| ||||| | || ||||| ||||||||||| ||||| | ||||| ||| || Sbjct 1481074 AACCAAATGCAAAGTCGATTCCTTTTGAATGTTATAATCTGAGAGCGTACGCCCATCCTC 1481133 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 |||||||| || || | || || | ||| ||||| || ||||||||||||||||| Sbjct 1481134 GAGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTG 1481193 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 || || ||| | | ||||| ||||| | | ||||| || | || | || || Sbjct 1481194 TATTTTAGCTTTGACATTTTCAATAGTGTCTGATGGCTCGACTTCTAAAGTTATGGTCTT 1481253 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| |||||||| |||||||| ||||| Sbjct 1481254 TCCGGTTAGAGTTTTAACAAAAATTTGCAT 1481283 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || || | |||||| || | ||| | ||||||||||| |||||||| |||||| Sbjct 1481282 ATCCCTCCTCGCAATCTCAATACAAGATGGAGGGTAGATTCTTTCTGAATGTTATAATCG 1481341 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||||||||| || || || | || | | ||| || || ||| Sbjct 1481342 GAAAGTGTTCGGCCGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGA 1481401 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || ||||| || |||||| ||| | | ||||| || || | | ||| Sbjct 1481402 GGAATACCCTCTTTATCTTGAATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGCTCG 1481461 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || |||| || | || || || || ||||| || || || ||||||||| || Sbjct 1481462 ACTTCCAAAGTGATGGTCTTTCCTGTAAGAGTCTTCACGAAGATCTGCATGCCT 1481515 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 |||||| || | || | || ||||||||||||||||| || || | || ||| Sbjct 1481524 TCTCAACACAAGGTGGAGGGTTGATTCTTTTTGAATGTTATAGTCAGAAAGGGTTCGACC 1481583 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 ||||||||| ||||| |||||| | || | | ||| || || || || || |||||||| Sbjct 1481584 ATCTTCAAGCTGTTTTCCAGCGAAAATCAACCTCTGCTGATCTGGGGGGATTCCTTCTTT 1481643 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 || |||||| || | | ||||| ||||||| | || || || | || | Sbjct 1481644 ATCTTGGATCTTTGCCTTGACATTTTCAATAGTGTCGGAAGGCTCTACTTCAAGTGTAAT 1481703 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||||||| | ||| ||||| || |||||||| Sbjct 1481704 AGTCTTGCCGGTTAAAGTCTTTACGAAGATCTGCAT 1481739 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| ||||||||||| ||||| | ||| | | ||| |||||||| || ||| Sbjct 1481771 GTCGATTCCTTTTGAATGTTATAATCCGAGAGAGTTCTACCATCCTCAAGTTGCTTGCCA 1481830 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | || || | |||||||| || || || ||||||||||| || || || Sbjct 1481831 GCGAAAATCAGCCTTTGTTGGTCTGGCGGGATACCTTCTTTGTCCTGGATTTTGGCCTTC 1481890 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || || | | || || |||| || | ||||| ||||||| |||| Sbjct 1481891 ACATTCTCAATTGTATCTGAAGGCTCAACTTCCAATGTGATGGTTTTTCCGGTCAAAGTT 1481950 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 1481951 TTCACAAAGATCTGCAT 1481967 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || ||||| | || ||||| || | ||| | || |||||||| |||||||| ||||| Sbjct 1463881 ATTCCGCCTCTGAGCCTCAAGACAAGATGAAGTGTTGATTCTTTCTGAATGTTATAATCC 1463940 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || |||||| | ||||| || ||| |||| | | |||||| || || Sbjct 1463941 GAAAGAGTGCGTCCATCTTCCAACTGTTTTCCGGCGAAGATTAACCTCTGTTGATCTGGT 1464000 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||||||||| || |||||| || | | ||||| ||||||| | |||| Sbjct 1464001 GGGATGCCTTCTTTATCCTGAATCTTGGCCTTAACATTTTCAATTGTGTCGGATGGTTCG 1464060 Query 114333 ACGTC 114337 || || Sbjct 1464061 ACCTC 1464065 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || ||||| | || ||||| || | ||| | || |||||||| || ||||||||||| Sbjct 1480142 ATGCCGCCTCTGAGCCTCAAGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCC 1480201 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||||| | ||| || ||||| | || | | ||| ||||| ||| Sbjct 1480202 GAAAGTGTGCGTCCGTCTTCCAATTGCTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGA 1480261 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| || || |||||| ||| | | |||| |||||| | | ||| Sbjct 1480262 GGGATCCCTTCCTTATCCTGAATCTTAGCTTTGACATTATCAATGGTGTCAGATGGCTCG 1480321 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || || || | |||||| ||||| || ||||| Sbjct 1480322 ACTTCGAGGGTGATTGTCTTTCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480371 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 114168 CTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAA 114227 |||||||| | || | || ||||||||||| |||||||| || | |||||| | Sbjct 1570243 CTCAAAACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGCGTACGACCA 1570184 Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 || || || || || || ||| |||| | | ||| ||||| || ||||| ||||| ||| Sbjct 1570183 TCCTCGAGCTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGAATTCCTTCCTTG 1570124 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347 || || || ||| | | |||| |||||| | | || || |||| || | Sbjct 1570123 TCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCCGATGGCTCAACTTCCAAAGTGATT 1570064 Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || || ||||| || || || |||||||| Sbjct 1570063 GTCTTTCCAGTAAGAGTCTTCACGAAGATCTGCAT 1570029 >seq12 Length=11555272 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/231 (69%), Gaps = 9/231 (4%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT---C 114211 ||| ||| | ||||| || |||| || || || |||||||| || || ||||||| | Sbjct 5006522 ACCTCCAAGAAGTCTAAAGACTAGGTGGATGGTGGATTCTTTCTGGATATTGTAATGAGC 5006463 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 | | | | | | ||| ||| | |||| || | || || |||||||||||||| || Sbjct 5006462 GAGCGTGTTGCCAT--TCTCCAACT-GTTTGCCTCCATAAATAAGACGCTGTTGGTCAGG 5006406 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 ||| |||||| | ||||| ||| ||||| | |||||| || ||||| ||| Sbjct 5006405 CTTGATGGATTCTTTCACTTCAATCGCTTGCTTTAGTTTTTCAACAGTATCGGTACTTTC 5006346 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || |||| | | |||| || || ||||||||||| | ||||| Sbjct 5006345 AACCTCAACGG---CGATGGTGCCCGTGAGGGTTTTTACAAAGACTTGCAT 5006298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420127221216024