Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_009016.1 Length=38197 Score E Sequences producing significant alignments: (Bits) Value seq157 215 1e-51 >seq157 Length=245904 Score = 215 bits (238), Expect = 1e-51 Identities = 390/565 (69%), Gaps = 4/565 (1%) Strand=Plus/Minus Query 21029 TGGATGGGTGGCAAGCGCCGCCTGGCTAAACACATCCTGCCAGAGTTCCCAGAGCACGAG 21088 ||||| || || || || || ||||| ||||| || | || || || | ||| Sbjct 174980 TGGATAGGCGGTAAACGGCGGCTGGCAAAACAGATTTTACCGCGCTTTCCGGCGCATACC 174921 Query 21089 TGCTATGTGGAGCCGTTCTGTGGGGCCGCTGCCCTGTTTTTTATGAAGATGCCGACCAAG 21148 ||||| ||||||||||| ||||| || || || || || ||||||||| || | ||| Sbjct 174920 TGCTACGTGGAGCCGTTTTGTGGCGCGGCGGCGCTCTTCTTTATGAAGTCACCCAGTAAG 174861 Query 21149 GTTGAAGTCATCAACGACGTGAACAGCGACCTGGTTAACCTGTACCGCGTGGTGCAGCAT 21208 | || || || ||||| | ||| |||| ||||| || || || || || | | || Sbjct 174860 GCGGAGGTGATTAACGATATCAACGGCGAGCTGGTCAATCTCTATCGGGTATTAAAACAC 174801 Query 21209 CACCTCGAGGAGTTCGTCCGCCAGTTCAAATGGGCGCTTATCAGCCGCGAGATGT-TCAA 21267 || || || ||||| | |||||||| ||||||||||| ||||||| | ||||| |||| Sbjct 174800 CATCTGGAAGAGTTTATGCGCCAGTTTAAATGGGCGCTGGTCAGCCGGGCGATGTATCAA 174741 Query 21268 GTGGCTGGACGATACGCCCGTCGAGACCCTGACCGATATTCAGCGTGCTGCCCGGTTCTA 21327 ||| | || ||||| ||||||| | |||||||| ||||| || ||||| ||||| Sbjct 174740 -TGGTTAAACATCACGCCGACCGAGACCTTAACCGATATCCAGCGAGCAGCCCGCTTCTA 174682 Query 21328 TTACCTGCAGCAGATGGGCTTCGGCGCCAAGATTACCGGCCGCACCTTTGGCACGGCCAC 21387 ||||||||| | || ||||||| |||| | | | | ||| ||||| | | || Sbjct 174681 TTACCTGCAAAAACAGGCGTTCGGCGGCAAGGTGGCGGAGCACACTTTTGGTTTGACTAC 174622 Query 21388 CACTACGCCGCCAAAACTGAACCTGCTGCGCCTCGAGGAGACGCTAAGCCAGGCGCACCT 21447 ||| ||| |||| ||||||||| | ||| | || || |||| | || || || Sbjct 174621 CACCACGGGGCCACGCCTGAACCTGTTACGCATGGAAGAAGAGCTATCGCTCGCTCATCT 174562 Query 21448 ACGCCTGAGCCGTGTTTACGTTGAGCACCTGGACT-GGCAGGCGTGCATGGAAAAGTACG 21506 || | || | |||| |||||||| | ||| || || || | || | Sbjct 174561 GCGATTATCACGCACCACCATTGAACACCTGGATTGGGCCAGC-TGTATTGCCCGTTATG 174503 Query 21507 ACCGACCGCACACCCTGTTTTACCTCGACCCGCCGTACTGGCAGACCGAGGGCTACGGTG 21566 |||| |||||||| ||||||||| |||||||||||| ||| || || ||||| || | Sbjct 174502 ACCGTCCGCACACGCTGTTTTACTGCGACCCGCCGTATTGGGGAACAGAAGGCTATGGCG 174443 Query 21567 TCGACTTCCCCTTCGAGCAATATGA 21591 |||| || | || |||||||| Sbjct 174442 TCGATTTTGGTCTGGAACAATATGA 174418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122106767041116