Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq3 158 1e-33 >seq3 Length=17889087 Score = 158 bits (174), Expect = 1e-33 Identities = 240/339 (71%), Gaps = 2/339 (1%) Strand=Plus/Minus Query 20243 GTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCC 20302 ||||||||||||| ||| || ||||| || | |||||| ||||||||||| |||||||| Sbjct 15712273 GTAACATGAGCAATCATGTATGTTAAAAGAGCATAGCTTGCAATGTTAAATGGAACTCCT 15712214 Query 20303 AAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAA 20362 || ||||||||| |||| |||||||||||||| || || | || || | || |||||| Sbjct 15712213 AAGCCCATGTCTGCCGATCTCTGATACAGCTGGCAAGATAATTCGCCATTTGCAACATAA 15712154 Query 20363 AATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCA 20421 ||||| || ||||| || || || || || |||||| || | | || ||||| Sbjct 15712153 AATTGTACCAAACAA-TGGCAAGGGGGTAGAGCCATCTTGTCTAAATGCATAGGATTCCA 15712095 Query 20422 CGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGA 20481 || |||||||| || |||| || | ||||| |||| || | | | | Sbjct 15712094 GGCGCACATAATCATCCTTCGGTCATTGGGATTGGTTTTAATAGTGTTTATTACAGCCAT 15712035 Query 20482 CAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAA 20541 |||||||| | || || ||||| || || | | | ||| || | || || || Sbjct 15712034 TAATTGGTCGACACCTTGTCCTGTGTAATCTGTGTGCATGTCTTTATAATCGGCTCCGAA 15711975 Query 20542 GTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 ||||||||||| || || |||||||| || | |||||| Sbjct 15711974 ATGCCTCCACTGAAATCCATAAACAGGCCCAAGATCCCC 15711936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441365064941680