Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_009526.1 Length=43864 Score E Sequences producing significant alignments: (Bits) Value seq89 253 6e-63 >seq89 Length=3091062 Score = 253 bits (280), Expect = 6e-63 Identities = 247/318 (78%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 7294 AATGTTAAATAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAAC 7353 |||| |||||||| || ||||| || || ||||| ||||||||||||||||||||||| Sbjct 140632 AATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACAAC 140573 Query 7354 GCCAAATGGTGTGAGTGTTACCACTTTCACTATCGCAGTTAACAGAACATTTACTAACGC 7413 || || ||||||||| | ||||| ||| | ||||| ||| | || ||||| || || Sbjct 140572 ACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAATGC 140513 Query 7414 TCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTTTTAGAAAACAAGCAGAAAA 7473 ||||| ||||| || ||||| || ||||| ||||| |||||||||||||||||| || Sbjct 140512 GCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGATAA 140453 Query 7474 TGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACG 7533 ||||||||| || || | |||||| || || |||||||| || || | |||||||| Sbjct 140452 TGTAAATAACTACTTGTTCAAAGGTAGTTTAGCGGGCGTTGACGGTCGCATTCAATCACG 140393 Query 7534 CAGTTATGAAAACAAAGACGGGCAACGTGTATTTGTCACAGAAGTAGTAGCGGACAGTGT 7593 || ||||||||| |||| || | ||||| ||||| || |||||||| || || || Sbjct 140392 TAGCTATGAAAACCAAGAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAGCGT 140333 Query 7594 TCAATTCTTAGAACCGAA 7611 ||||||| | ||||| || Sbjct 140332 TCAATTCCTTGAACCTAA 140315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140240865126024