Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_009760.1 Length=218948 Score E Sequences producing significant alignments: (Bits) Value seq89 161 1e-34 >seq89 Length=3091062 Score = 161 bits (178), Expect = 1e-34 Identities = 207/283 (73%), Gaps = 12/283 (4%) Strand=Plus/Minus Query 164077 ATTATTTTACTGCTGTTTTCAACTCTTTACCAGCTTTGAATGCCGGTACTTTTGTTGCAG 164136 ||||||||||||| ||| || ||||||||||||| ||||| || ||||| |||||| Sbjct 1968000 ATTATTTTACTGCGTCTTTTAAAGCTTTACCAGCTTTAAATGCTGGAACTTTGCTTGCAG 1967941 Query 164137 CAATTTCAATTTCTTCACCAGTTTGTGGGTTACGTCCCTTACGAGCCGCACGGTCACGAG 164196 || |||||||||| ||||||||| |||||||| || |||||||| || || || || Sbjct 1967940 GGATATCAATTTCTTTACCAGTTTGAGGGTTACGGCCTTTACGAGCAGCGCGTTCGCGTA 1967881 Query 164197 TTTCGAATGTACCAAAGCCGATTAACTGTACTTTGTTACCTTCTGCTAAAG---CGTTTG 164253 |||||| |||| || || ||||| |||||||| | ||||| | |||| | ||| Sbjct 1967880 CTTCGAAGTTACCGAATCCAATTAATTGTACTTTTTCACCTTTAG--AAAGTGATGATTG 1967823 Query 164254 ---TGATACCGCCAAATACTGCGTCTACAGCTTTTGTAGCATCCTTTTTAGAGATTTCTG 164310 |||| | |||||||| ||||||||| ||| || ||||||| | || | Sbjct 1967822 AATTGAT----TCGAATACTGCATCTACAGCTAAGCCAGCTTCTTTTTTAGTTAAGTCAG 1967767 Query 164311 CTGTTTCAGCTACGTGGTTGATTAATTCAGTTTTGTTCATGAT 164353 || ||| || || |||||||| || || |||||||| || Sbjct 1967766 CTTGTTCTGCAACAGCATTGATTAAATCTGTCTTGTTCATTAT 1967724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700493323639360