Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_009810.1 Length=38867 Score E Sequences producing significant alignments: (Bits) Value seq89 156 1e-33 >seq89 Length=3091062 Score = 156 bits (172), Expect = 1e-33 Identities = 182/246 (74%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 35540 GTTGCGACTTTTACTTTAGCTGTAAATCGCCCATTTAAAAATACACAAGGAGAACAAGAA 35599 ||||||||||||||| |||| ||||| || | |||| |||| | ||||| |||| ||| Sbjct 140556 GTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAATGCGCAAGGGGAACGCGAA 140497 Query 35600 GCAGATTTCATTAATTGTGTTGTTTGGCGTAAACCAGCGGAAAACGCAGCTAATTTCTTG 35659 |||||||||||||||||||| |||| | |||| ||| || || | | ||| | |||| Sbjct 140496 GCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGATAATGTAAATAACTACTTG 140437 Query 35660 AAAAAAGGAAGCATGGCAGGCGTTGATGGACGTGTTCAAACTCGTAATTATGAGGACAGC 35719 ||||| || | || |||||||| || || ||||| | |||| ||||| || Sbjct 140436 TTCAAAGGTAGTTTAGCGGGCGTTGACGGTCGCATTCAATCACGTAGCTATGAAAACCAA 140377 Query 35720 GACGGTAAACGCGTTTTCGTTACTGAGGTAGTTGCTGAAACAGTTCAATTCTTAGAGCCT 35779 || || || ||||| || ||||| |||||| ||| | ||||||||| | || ||| Sbjct 140376 GAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAGCGTTCAATTCCTTGAACCT 140317 Query 35780 AAAAAT 35785 |||||| Sbjct 140316 AAAAAT 140311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124250731346196