Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq570 98.7 1e-15 seq105 86.0 7e-12 >seq570 Length=38645 Score = 98.7 bits (108), Expect = 1e-15 Identities = 168/239 (70%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 10835 CGGTTCGTCGCCGCGATGACAACGATGCC--CGTCTCGTTATCAAAGCCATCCATCTCAG 10892 ||||| || || || || | || |||||| ||| | | | |||| |||||||| ||| Sbjct 30083 CGGTTAGTAGCAGCTATCATAATGATGCCTTCGTTT--TCACCAAATCCATCCATTTCAA 30026 Query 10893 TCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGG-GCATACCACCCGCACTG 10951 || | |||||| | |||||||| |||||||| | | || || ||| |||| Sbjct 30025 CTAATAATTGATTCAATGTTTGTTCACGTTCATCGTGGCCACCGCCGAC-ACCAGCACCA 29967 Query 10952 CGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGG 11011 ||||| || || || |||||||| || ||||||| |||||| || ||||| Sbjct 29966 CGTTGACGTCCAACTGCATCAATTTCGTCAATGAAAATGATACAAGGCGCATTTTTCTTA 29907 Query 11012 GCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAA 11070 ||| |||||| | ||| || || | | ||||||||||| |||||||| || ||||| Sbjct 29906 GCATTTTCAAATAAATCACGTACACGGCTTGCACCGACACCAACAAACATCTCAACAAA 29848 >seq105 Length=1502237 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 114512 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 114571 || || |||| ||||| ||||| | ||| || |||||||||||||| |||| ||| Sbjct 285626 GTATATTCTACTATTTCTGTACAAAGATTGCTACATTTAATGGTGCCCAAATTCTGTTGG 285567 Query 114572 TTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGG 114631 || || ||| |||| |||||||| ||||| |||||||| || || || ||| || Sbjct 285566 TTGGATTTTCTGTTGCACGCATCTTTGTACAGCATGTAAGGAACACCGGTTTCCACCTGA 285507 Query 114632 GACTTGAGAATAGCCTTCCA 114651 |||| | ||||| ||||| Sbjct 285506 GACTCAATTATAGCATTCCA 285487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597343131378160