Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq14 105 7e-18 seq121 102 9e-17 seq1 102 9e-17 seq91 100 3e-16 seq20 100 3e-16 seq45 98.7 1e-15 seq5 98.7 1e-15 seq104 96.9 4e-15 seq6 95.1 1e-14 seq7 89.7 6e-13 seq46 87.8 2e-12 seq23 87.8 2e-12 >seq14 Length=11141052 Score = 105 bits (116), Expect = 7e-18 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| ||||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 9307110 AAAAAATTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 9307169 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 9307170 TGACCACTATACTACCGAGGA 9307190 >seq121 Length=982330 Score = 102 bits (112), Expect = 9e-17 Identities = 86/103 (83%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 56977 AACAACAAATTAACGTTTATGAAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCT 57035 ||||| || ||| |||| ||||||| || ||| |||| | |||||||||| ||||| Sbjct 460229 AACAA-AAGTTAGAATTTAAAAAAAATTATCCTCCCCGGCGGGGAATCGAACCCCGGTCT 460171 Query 57036 CCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGA 57078 |||||||||||||||| ||||| ||||||||||||||||||| Sbjct 460170 CCCGCGTGACAGGCGGGGATACTGACCACTATACTACCGAGGA 460128 >seq1 Length=33720124 Score = 102 bits (112), Expect = 9e-17 Identities = 73/83 (88%), Gaps = 2/83 (2%) Strand=Plus/Plus Query 56998 AAAAATT--TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 ||||||| |||||| |||| | |||||||||| ||||||||||||||||||||| || Sbjct 28770806 AAAAATTAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 28770865 Query 57056 ACTCACCACTATACTACCGAGGA 57078 ||| ||||||||||||||||||| Sbjct 28770866 ACTGACCACTATACTACCGAGGA 28770888 Score = 96.9 bits (106), Expect = 4e-15 Identities = 75/87 (86%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 28866700 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 28866759 Query 57067 TACTACCGAGGA-TTGAATATATAACT 57092 |||||||||||| ||| || || |||| Sbjct 28866760 TACTACCGAGGACTTGTAT-TAAAACT 28866785 Score = 95.1 bits (104), Expect = 1e-14 Identities = 71/82 (87%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 ||||||| | ||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 28592640 AAAAATTAACCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 28592699 Query 57057 CTCACCACTATACTACCGAGGA 57078 || ||||||||||||||||||| Sbjct 28592700 CTGACCACTATACTACCGAGGA 28592721 >seq91 Length=2340937 Score = 100 bits (110), Expect = 3e-16 Identities = 72/82 (88%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 56998 AAAAATT-TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||||| |||||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 1004985 AAAAATAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 1005044 Query 57057 CTCACCACTATACTACCGAGGA 57078 || ||||||||||||||||||| Sbjct 1005045 CTGACCACTATACTACCGAGGA 1005066 >seq20 Length=9936027 Score = 100 bits (110), Expect = 3e-16 Identities = 74/85 (87%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 56998 AAAAATTTTC-TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 ||||||| | ||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 6525635 AAAAATTAACCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 6525576 Query 57057 CTCACCACTATACTACCGAGGATTG 57081 || |||||||||||||||||||||| Sbjct 6525575 CTGACCACTATACTACCGAGGATTG 6525551 >seq45 Length=4842313 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||||| | |||||||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 639036 AAAAATTACCCCCTCGGCAGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGATTAC 638977 Query 57058 TCACCACTATACTACCGAGGAT 57079 | ||||||||||||| |||||| Sbjct 638976 TTACCACTATACTACTGAGGAT 638955 >seq5 Length=17325453 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| | |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 1984265 AAAAAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1984206 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||||||| Sbjct 1984205 TGACCACTATACTACCGAGGAT 1984184 >seq104 Length=1475941 Score = 96.9 bits (106), Expect = 4e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| | |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 1091989 AAAAAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 1092048 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 1092049 TGACCACTATACTACCGAGGA 1092069 >seq6 Length=15957911 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 4167906 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 4167847 Query 57067 TACTACCGAGGA 57078 |||||||||||| Sbjct 4167846 TACTACCGAGGA 4167835 >seq7 Length=14356694 Score = 89.7 bits (98), Expect = 6e-13 Identities = 57/62 (92%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 |||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| Sbjct 2911527 AATCGAACCCCGGTCTCCCGCGTGACAGGCTGGGATACTGACCACTATACTACCGAGGAT 2911468 Query 57080 TG 57081 || Sbjct 2911467 TG 2911466 >seq46 Length=4728336 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || || || || || ||||||| ||||| ||| | || |||| ||||||||| || || Sbjct 1480637 TCTTTCTGGATGTTATAATCAGAAAGAGTGCGCCCATCTTCTAACTGCTTACCGGCAAAG 1480696 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 ||||| | ||||||||| | ||| | | || || ||| ||| |||| | ||||| | Sbjct 1480697 ATGAGCCTCTGCTGGTCTGGTGGGATACCTTCTTTATCC-TGAATTTTCGCTTTGACATT 1480755 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||| || | ||| || || | ||||| || || || |||| || || || Sbjct 1480756 TTCAATCGTATCCGATGGTTCGACTTCAAGAGTGATCGTCTTTCCTGTTAAAGTTTTCAC 1480815 Query 42197 AAAGATTTGCAT 42208 |||||||||||| Sbjct 1480816 AAAGATTTGCAT 1480827 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||| || | | ||||||||||| || ||||||||||| || ||||| | Sbjct 1481056 ACCTCCTCTCAACCTGAGAACCAAATGCAAAGTCGATTCCTTTTGAATGTTATAATCTGA 1481115 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || ||| | || || || || || || || || || || | ||||||||| | || Sbjct 1481116 GAGCGTACGCCCATCCTCGAGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGGTCTGGGGG 1481175 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || || ||||| ||||| ||||| | | | ||||| | || || Sbjct 1481176 AATGCCTTCTTTGTCTTGTATTTTAGCTTTGACATTTTCAATAGTGTCTGATGGCTCGAC 1481235 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | || ||||| || || ||||| || || ||||| |||||||| Sbjct 1481236 TTCTAAAGTTATGGTCTTTCCGGTTAGAGTTTTAACAAAAATTTGCAT 1481283 >seq23 Length=8445320 Score = 87.8 bits (96), Expect = 2e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 57008 TCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTAT 57067 ||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||| Sbjct 7779881 TCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTAT 7779822 Query 57068 ACTACCGAGGA 57078 ||||| ||||| Sbjct 7779821 ACTACTGAGGA 7779811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543203280195680