Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq46 158 1e-33 seq105 95.1 1e-14 >seq46 Length=4728336 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| || || || | ||| | |||||||| ||||||||||| ||||||| Sbjct 1481056 ACCTCCTCTCAACCTGAGAACCAAATGCAAAGTCGATTCCTTTTGAATGTTATAATCTGA 1481115 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || ||| | || || || || || |||||| |||| |||| ||||||||| || || Sbjct 1481116 GAGCGTACGCCCATCCTCGAGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGGTCTGGGGG 1481175 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||| |||||||| ||||||| |||| ||||| ||| || | || || | || | Sbjct 1481176 AATGCCTTCTTTGTCTTGTA-TTTTAGCTTTGACATTTTCAATAGTGTCTGATGGCTCGA 1481234 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| ||||| |||||| ||||| | |||||| || ||||||||||| Sbjct 1481235 CTTCTAAAGTTATGGTCTTTCCGGTTAGAGTTTTAACAAAAATTTGCAT 1481283 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || || | ||| || || || || | || |||||||| ||||| |||||||| | | Sbjct 1479917 CCTCCTCGGAGTCTCAGTACGAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCGGAG 1479976 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || || | ||||| || |||||||||||| | ||||||| ||||| || || ||| Sbjct 1479977 AGTGTACGACCATCTTCCAGTTGCTTGCCGGCAAAGATGAGCCTTTGCTGATCTGGGGGA 1480036 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 ||||||||||| ||||| ||||| ||||| || | ||||| | || ||| Sbjct 1480037 ATTCCTTCTTTATCTTGGATTTTGGCTTTTACGTTTTCAATGGTATCTGATGGCTCGACT 1480096 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||| | ||| ||||| |||||||| || ||||| || ||||| Sbjct 1480097 TCGAGAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 1480143 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || | |||||| | ||| || || | || ||||||||||||||||| || || | Sbjct 1481513 CCTCCTCTCAATCTCAACACAAGGTGGAGGGTTGATTCTTTTTGAATGTTATAGTCAGAA 1481572 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || | ||||||||||| || || || |||| | || |||||| || || || Sbjct 1481573 AGGGTTCGACCATCTTCAAGCTGTTTTCCAGCGAAAATCAACCTCTGCTGATCTGGGGGG 1481632 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 ||||||||||| ||||| || ||| ||| ||| || | || || | || ||| Sbjct 1481633 ATTCCTTCTTTATCTTGGATCTTTGCCTTGACATTTTCAATAGTGTCGGAAGGCTCTACT 1481692 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||||| ||||| |||||||| || ||||| Sbjct 1481693 TCAAGTGTAATAGTCTTGCCGGTTAAAGTCTTTACGAAGATCTGCAT 1481739 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 |||||||| ||||||||||| ||||| | || || | | || ||||| |||||||| Sbjct 1481771 GTCGATTCCTTTTGAATGTTATAATCCGAGAGAGTTCTACCATCCTCAAGTTGCTTGCCA 1481830 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| |||| || ||||| || || || |||||||| || || ||||| ||| Sbjct 1481831 GCGAAAATCAGCCTTTGTTGGTCTGGCGGGATACCTTCTTTGTCCTGGATTTTGGCCTTC 1481890 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | |||||| | || ||||| | || | ||| || |||||||||||| Sbjct 1481891 ACATTCTCAATTGTATCTGAAGGCTCAACTTCCAATGTGATGGTTTTTCCGGTCAAAGTT 1481950 Query 64427 TTTACGAAAATTTGCATT 64444 || || || || |||||| Sbjct 1481951 TTCACAAAGATCTGCATT 1481968 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||||||||| || |||||||||| | || || | |||||||| || |||||| Sbjct 1480403 GTGGATTCTTTTTGGATATTGTAATCTGATAATGTACGACCATCTTCAAGTTGTTTGCCG 1480462 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| | | |||||| || ||||| || |||||||| ||||| ||||| ||| Sbjct 1480463 GCAAAAATCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGAATTTTAGCTTTT 1480522 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||||||| | || ||||| | || | || || || || || ||| Sbjct 1480523 ACGTTTTCAATTGTATCAGAAGGTTCGACTTCCAAGGTGATTGTTTTCCCTGTTAATGTT 1480582 Query 64427 TTTACGAAAATTTGCATT 64444 || || || ||||||||| Sbjct 1480583 TTCACAAAGATTTGCATT 1480600 Score = 113 bits (124), Expect = 5e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || || |||| ||||||||||| ||||||||||| || | | || || | |||||| Sbjct 1463674 ACAAGGTGAAGTGTCGATTCTTTCTGAATGTTGTAGTCGGAAAGAGTTCGACCATCTTCA 1463733 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || || || |||||| | || |||| ||||| || |||||||| |||||||| || || Sbjct 1463734 AGTTGTTTACCGGCAAAGATAAGCCTTTGCTGATCTGGAGGAATACCTTCTTTATCCTGG 1463793 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | | || ||||| ||| || | ||| ||| | || ||||| | ||| | || || Sbjct 1463794 A-TCTTAGCTTTCACATTTTCAATTGTGTCAGATGGTTCTACTTCCAAAGTAATTGTTTT 1463852 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || || || ||||| || || ||||||||| Sbjct 1463853 ACCAGTTAAGGTTTTAACAAAGATTTGCATT 1463883 Score = 111 bits (122), Expect = 2e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || ||||||| || |||||||| || ||||||||||| | | ||||| ||||||| Sbjct 1480163 ACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCCGAAAGTGTGCGTCCGTCTTCC 1480222 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | ||||| || ||| |||| | || ||||||||| ||||| || ||||| || || || Sbjct 1480223 AATTGCTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGAGGGATCCCTTCCTTATCCTG- 1480281 Query 64355 ATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 | | || ||||| ||| || | || ||| | || ||||| | || | ||||| Sbjct 1480282 AATCTTAGCTTTGACATTATCAATGGTGTCAGATGGCTCGACTTCGAGGGTGATTGTCTT 1480341 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || |||||||| || || |||||||| Sbjct 1480342 TCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480371 Score = 100 bits (110), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | ||| || | || || || | || ||||||||||| |||||||| || | Sbjct 1570256 ACCTCCTCTCAACCTCAAAACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGA 1570197 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || || |||||||| ||||| | || | | ||||||||| || || Sbjct 1570196 AAGCGTACGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCTGGGGG 1570137 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCA 64394 ||||||||| || ||||| | |||| ||||| ||| || | || || | || | Sbjct 1570136 AATTCCTTCCTTGTCTTGGA-TTTTAGCTTTGACATTGTCAATGGTGTCCGATGGCTCAA 1570078 Query 64395 CTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||| | ||| | ||||| || || | ||| || ||||| || |||||||| Sbjct 1570077 CTTCCAAAGTGATTGTCTTTCCAGTAAGAGTCTTCACGAAGATCTGCATTTT 1570026 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288 |||||||| | || | || ||||||||||| |||||||| || | | || || | Sbjct 1570471 CTAAGCACCAAGTGGAGGGTTGATTCTTTTTGGATGTTGTAGTCAGAAAGAGTACGTCCA 1570412 Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348 || || |||||||| || ||| | || | | ||||||||| || ||||||||||| || Sbjct 1570411 TCCTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGAATTCCTTCCTTG 1570352 Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 ||||| || || ||| ||| ||| | ||||| | || ||||| | || | | Sbjct 1570351 TCTTGGATCTTAGCCTTGACATTCTCAATGGTATCGGATGGTTCAACTTCCAAGGTGATG 1570292 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || || | || || ||||| || ||||| Sbjct 1570291 GTCTTTCCAGTAAGGGTCTTCACGAAGATCTGCAT 1570257 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || || |||| || |||||||||||||| ||||| || | | ||||| | ||||| Sbjct 1480847 ACGAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCCGAAAGAGTGCGTCCATCTTCC 1480906 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | ||| || || || | || | || ||| || || || || || |||||||| || || Sbjct 1480907 AACTGTTTTCCAGCGAAGATTAACCTCTGTTGATCTGGTGGGATGCCTTCTTTATCCTGA 1480966 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 || || ||| ||| || | ||| || | || || || | ||| | ||| ||| Sbjct 1480967 ATCTTGGCCTTAACATTTTCAATTGTGTCGGATGGTTCGACCTCAAGAGTGATGGTTTTG 1481026 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || |||||||| |||||||| |||||||| Sbjct 1481027 CCTGTCAAAGTCTTTACGAATATTTGCAT 1481055 Score = 91.5 bits (100), Expect = 1e-13 Identities = 117/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 64287 CGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTT 64346 |||||||||| ||||| || ||| |||| | || |||||| || |||||||| || |||| Sbjct 1463498 CGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGAATACCCTCTT 1463557 Query 64347 TTTCTTGTATTTTTTGCTTTA-CAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405 | ||||| || || |||||| || || | ||| ||| | || ||||| | || Sbjct 1463558 TATCTTGAATCTTA-GCTTTAACATTTTCAATTGTGTCAGATGGTTCTACTTCCAAGGTG 1463616 Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 | || || || || || ||||| || |||||||||||| Sbjct 1463617 ATTGTTTTACCAGTTAAGGTTTTAACAAAAATTTGCATT 1463655 >seq105 Length=1502237 Score = 95.1 bits (104), Expect = 1e-14 Identities = 264/403 (66%), Gaps = 4/403 (1%) Strand=Plus/Minus Query 154626 TATTGCACAATTTCTGCGCACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTC 154685 |||| || ||||||| || | ||| || ||| ||||||||||| || | || || Sbjct 285623 TATTCTACTATTTCTGTACAAAGATTGCTACATTTAATGGTGCCCAAATTCTGTTGGTTG 285564 Query 154686 GATTTGATGTTGCATGCGTCTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTT 154745 ||||| ||||||| || |||||||||| ||||| || || |||||||| || | Sbjct 285563 GATTTTCTGTTGCACGCATCTTTGTACAGCATGTAAGGAACACCGGTTTCCACCTGAGAC 285504 Query 154746 TCAATAATTGTGCGAAACAGACTTCGCGCCTCAACTTGACAAGTAAATCGATTTTCGCTC 154805 ||||| || | ||| ||| || |||| ||| | || | ||| |||| | Sbjct 285503 TCAATTATAGCATTCCACAAGTTTCTTGCGTCAATTTGTCGTATATAACGACCTTCGTTT 285444 Query 154806 TCATATTGTTCGTACAGTTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAG 154865 ||||||| | | ||||| | ||||| | | || | ||||| | ||| ||||| Sbjct 285443 TCATATTTTACATACAGATCCTCAAAGTTTTTACCCCAGACGTCATGAAGACCAGGACAT 285384 Query 154866 CGGTCGGGACACATCAATGACCACATTTCGTTTT--GTTGTACGCGTTTCATAAACAAAT 154923 | || ||||| | ||| |||||| | || || || | || ||| ||||||| Sbjct 285383 TTATGCGGGCACAT--AAGACTCCATTTCTTATTAGATTCAACCCTTTCCATGAACAAAT 285326 Query 154924 CCGGCACCCACAAAGCGTACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTC 154983 | || | ||| | || || || | |||||| ||| | ||||| || | ||| Sbjct 285325 CAGGAATCCAAAGTGCATAAAAAAGATCACGGGCCCGTACCTCTTCCTTTCCAGTATTTT 285266 Query 154984 GCTTTAAATTCAAAAAATCATATATGTCGGCGTGCCACGGCTC 155026 || |||| | ||| ||| | || || || ||||| ||||| Sbjct 285265 TTTTCAAATCGAGAAACTCAAAAATATCAGCATGCCAAGGCTC 285223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499636043724880