Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_010342.1 Length=39245 Score E Sequences producing significant alignments: (Bits) Value seq157 210 5e-50 >seq157 Length=245904 Score = 210 bits (232), Expect = 5e-50 Identities = 370/536 (69%), Gaps = 5/536 (1%) Strand=Plus/Minus Query 21297 TGGATGGGCGGCAAGCGCCGCCTGGCTAAACATATCCTGCCGAACTTCCCTGACCACCAG 21356 ||||| ||||| || || || ||||| ||||| || | ||| ||| || | || Sbjct 174980 TGGATAGGCGGTAAACGGCGGCTGGCAAAACAGATTTTACCGCGCTTTCCGGCGCATACC 174921 Query 21357 TGCTACGTTGAGCCCTTCGCGGGCGGCGCGGCGCTGTTCTTCATGAAGCAACCCAGCAAA 21416 |||||||| ||||| || |||| |||||||| ||||| |||||| |||||| || Sbjct 174920 TGCTACGTGGAGCCGTTTTGTGGCGCGGCGGCGCTCTTCTTTATGAAGTCACCCAGTAAG 174861 Query 21417 GTGGAGGTGATCAACGACACCAACAGCGACCTGGTCAACTTGTACCGGGTGGTGCAGCAC 21476 | ||||||||| ||||| | |||| |||| |||||||| | || ||||| | | ||| Sbjct 174860 GCGGAGGTGATTAACGATATCAACGGCGAGCTGGTCAATCTCTATCGGGTATTAAAACAC 174801 Query 21477 CACCTGGAGGAGTTCGTGCGCCAGTTCAAGTGGGCGCTGGTCTCGCGTGAGATGTTCGCG 21536 || ||||| ||||| |||||||||| || |||||||||||| || | ||||| Sbjct 174800 CATCTGGAAGAGTTTATGCGCCAGTTTAAATGGGCGCTGGTCAGCCGGGCGATGTATCAA 174741 Query 21537 TGGGAGAAGCTCAAGCACACCGACACGCTAACGGATATCCAGCGGGCCGCGCGGTTCTAC 21596 ||| || ||| || ||||| || |||| ||||||||||| || || || ||||| Sbjct 174740 TGGTTAAACATCACGCCGACCGAGACCTTAACCGATATCCAGCGAGCAGCCCGCTTCTAT 174681 Query 21597 TACCTGCAGCAGCAGGGGTTTGGCGGGAAGGTCAACTCGAAC---TTTGGCATCTCGACC 21653 |||||||| | |||| ||| ||||| ||||| | || ||||| | | ||| Sbjct 174680 TACCTGCAAAAACAGGCGTTCGGCGGCAAGGTGGCGGAGCACACTTTTGGTTTGACTACC 174621 Query 21654 ACGTCTGGCCCTGGGCTTAACCTGCTGCGGATCGAGGAGAACCTCAGCCAGGCGCACTTG 21713 || | || || | || |||||| | || || || || | || | || || || Sbjct 174620 ACCACGGGGCCACGCCTGAACCTGTTACGCATGGAAGAAGAGCTATCGCTCGCTCATCTG 174561 Query 21714 CGGCTCTCGCGCGTGTTCGTTGAGAACATGGACT-GGAAAGCGGTCATGAAGCGCTACGA 21772 || | || ||| | |||| || |||| | || ||| || || || || || Sbjct 174560 CGATTATCACGCACCACCATTGAACACCTGGATTGGGCCAGCTGT-ATTGCCCGTTATGA 174502 Query 21773 CCGGCCGCACACGTTGCACTATCTCGACCCGCCGTATTGGGCGACCGCTGGCTATG 21828 ||| ||||||||| || || ||||||||||||||||| || | ||||||| Sbjct 174501 CCGTCCGCACACGCTGTTTTACTGCGACCCGCCGTATTGGGGAACAGAAGGCTATG 174446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125460311207868