Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_010808.1 Length=44342 Score E Sequences producing significant alignments: (Bits) Value seq89 159 1e-34 >seq89 Length=3091062 Score = 159 bits (176), Expect = 1e-34 Identities = 226/318 (71%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 7369 AATGTTAAACAGAGCAGTATTAGTAGGACGCTTAACAAAAGACCCAGAATTAAGAAGCGC 7428 |||| |||| |||| || ||||| || || ||||| ||||| ||||||| |||| | Sbjct 140632 AATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACAAC 140573 Query 7429 GCCAAATGGCGTAAATGTAGGTACATTCACATTGGCAGTAAACAGAACATTCACGAATGC 7488 || ||||| | ||| | || || || | ||||||||| | || || || ||||| Sbjct 140572 ACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAATGC 140513 Query 7489 TCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGTTCAAGAAACAAGCTGAAAA 7548 ||||| || || ||||||||||| || || || || || | |||||||| || || Sbjct 140512 GCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGATAA 140453 Query 7549 TGTTAAAAACTACCTTTCTAAAGGGTCGCTGGCAGGTGTAGACGGGCGACTACAAACACG 7608 ||| || |||||| | | ||||| | || || || ||||| || | ||| |||| Sbjct 140452 TGTAAATAACTACTTGTTCAAAGGTAGTTTAGCGGGCGTTGACGGTCGCATTCAATCACG 140393 Query 7609 TAGCTACGAAAATAAAGTCGGGCAACGTGTATTTGTGACAGAAGTAGTAGCGGACAGTGT 7668 |||||| ||||| ||| || | ||||| ||||| || |||||||| || || || Sbjct 140392 TAGCTATGAAAACCAAGAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAGCGT 140333 Query 7669 TCAATTCTTAGAACCGAA 7686 ||||||| | ||||| || Sbjct 140332 TCAATTCCTTGAACCTAA 140315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141770439660096