Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_011612.1 Length=45344 Score E Sequences producing significant alignments: (Bits) Value seq89 93.3 1e-14 >seq89 Length=3091062 Score = 93.3 bits (102), Expect = 1e-14 Identities = 148/208 (71%), Gaps = 7/208 (3%) Strand=Plus/Minus Query 1039 TTTTATCTTTTCTTCTAAACGAAACATTGCCTCTTTTTGTGATTGTTTTGTATTTTTGTT 1098 ||||||| | || ||||| | || | | ||||| || || ||| |||| |||||| Sbjct 2303303 TTTTATCCTATCATCTAATTGGAATAAAGATTCTTTCTGAGAAATTTTAGTATCTTTGTT 2303244 Query 1099 CAAGACAACACTTACGC-GCTTCCATTTATCTGTGTATGGATCTTTGTATTTCTCGTAGT 1157 || ||||||| ||| | || || ||||||| |||||| ||||| || |||| || Sbjct 2303243 CATTACAACACATACTCTGCGTC-ATTTATCCGTGTATAAGTCTTTATACTTCTTATATA 2303185 Query 1158 ATCTGTATTTAGTTTCGTTGtttttatttttgaatttttCGAACCACAT-GTTTATACCT 1216 | | ||||||||||| | ||||| ||| |||| ||| ||||||| | ||| ||| Sbjct 2303184 AGCGGTATTTAGTTTTGCCTGCTTTATCTTTAAATTGTTCTGACCACATAATGTATTCCT 2303125 Query 1217 CCT----GTAAGAACGTATGTTCTATAT 1240 ||| | |||||||| |||| |||| Sbjct 2303124 CCTTACATTTAGAACGTAAGTTCAATAT 2303097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144976786277544