Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_011614.1 Length=42526 Score E Sequences producing significant alignments: (Bits) Value seq89 187 7e-43 >seq89 Length=3091062 Score = 187 bits (206), Expect = 7e-43 Identities = 232/318 (73%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 7069 AATGTTAAACAGAATAGTATTAGTAGGGCGATTAACAAAAGACCCAGAATTAAGAAGCAC 7128 |||| |||| ||| | || ||||| || || ||||| ||||| ||||||| |||| || Sbjct 140632 AATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACAAC 140573 Query 7129 GCCAAATGGCGTAAATGTAGGGACATTCACATTAGCAGTAAACAGAACATTTACGAATGC 7188 || ||||| | ||| | ||| || || ||||||||||| | || ||||| ||||| Sbjct 140572 ACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAATGC 140513 Query 7189 TCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGTTCAAAAAACAAGCCGAAAA 7248 ||||| || || ||||||||||| || || || || || | ||||||||| || || Sbjct 140512 GCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGATAA 140453 Query 7249 TGTTAAAAACTACCTTTCTAAAGGGTCGCTGGCAGGTGTAGACGGGCGACTACAAACACG 7308 ||| || |||||| | | ||||| | || || || ||||| || | ||| |||| Sbjct 140452 TGTAAATAACTACTTGTTCAAAGGTAGTTTAGCGGGCGTTGACGGTCGCATTCAATCACG 140393 Query 7309 TAACTACGAAAATAAAGACGGACAACGTGTATTTGTGACAGAAGTAGTAGCGGACAGTGT 7368 || ||| ||||| |||| |||| ||||| ||||| || |||||||| || || || Sbjct 140392 TAGCTATGAAAACCAAGAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAGCGT 140333 Query 7369 TCAATTCTTAGAACCGAA 7386 ||||||| | ||||| || Sbjct 140332 TCAATTCCTTGAACCTAA 140315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135959336409312