Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_011976.1 Length=43016 Score E Sequences producing significant alignments: (Bits) Value seq157 156 1e-33 >seq157 Length=245904 Score = 156 bits (172), Expect = 1e-33 Identities = 282/406 (69%), Gaps = 11/406 (3%) Strand=Plus/Plus Query 35104 CGCGATGGTGAGTTGTTGCAGGTCAAGAGAATCAGCACCGAACGTCCGGACGGGAAGAAA 35163 ||||| ||||||||| ||| |||| | | | | || |||| ||||| || ||| Sbjct 41837 CGCGACGGTGAGTTGAAGCAAATCAAACGGTTGGGGATTGAGCGTCATGACGGTAAAAAA 41896 Query 35164 GTCATCATGGCAGAAGGTGACTGTGAACCCTGTCTGTTCGGATGGCAGGCTCTCGATGCT 35223 |||||||||| || || ||||||||||||||||| || |||||||| || | | Sbjct 41897 ATCATCATGGCGGAGTCCGATTGTGAACCCTGTCTGTTTGGCTGGCAGGCCATCAACCCC 41956 Query 35224 GGCGTGAGGGC-----GGTTGTGCTTTGCGAAGGCGAAATTGATTGCATGAGCTATGC-G 35277 | || || ||| ||| |||| |||||||||||||| |||||| ||| | Sbjct 41957 AAAG--AGCGCAATCTGGTGGTGATTTGTGAAGGCGAAATTGACGCCATGAG-TATTCAC 42013 Query 35278 CAATACGGAATTCCGGCGCTATCTGTCCCGTTCGGTGGCGGGAAAGGCGCTAAGCAACAG 35337 || ||||| ||||||| || || || || ||||||||||| | || || ||||| ||| Sbjct 42014 CAGTACGGCCTTCCGGCACTGTCGGTTCCCTTCGGTGGCGGAACGGGGGCCAAGCAGCAG 42073 Query 35338 TGGATTGAGTTTGAATACCATAACCTCGACAGGTTT-GAAGAAATATTCATTTCGATGGA 35396 ||||||||| ||| ||| | || || | || |||| ||||| |||||| | | ||||| Sbjct 42074 TGGATTGAGCATGAGTACGAAAATCT-GTCACGTTTCGAAGAGATATTCCTGTGCATGGA 42132 Query 35397 CGGTGATGATGTTGGTCGTGAAGCTGCAAGGGAAATCGCAAGCCGACTCGGTGAACATCG 35456 | || | | || | || || | |||||| || | ||| || || ||||| Sbjct 42133 CATGGACGCCGCCGGGCAATCCGCCGCCAAGGAAATTGCTACCCGTCTGGGGATCCATCG 42192 Query 35457 CTGCCGTCTGGTTACACTGCCGCACAAAGATATCAACGAATGCCTG 35502 ||| | | || | ||| || ||||| || |||||||||||| Sbjct 42193 TTGCAGCTTTGTGAAACTCCCTCACAAGGACGCTAACGAATGCCTG 42238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137527310304072