Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_012635.1 Length=168394 Score E Sequences producing significant alignments: (Bits) Value seq89 116 4e-21 >seq89 Length=3091062 Score = 116 bits (128), Expect = 4e-21 Identities = 195/281 (69%), Gaps = 1/281 (0%) Strand=Plus/Minus Query 43891 AATATCAGGATACATCCTTTTGCTTGCACACTCTAAAGCAAGCTGCTTAATATCATAGTT 43950 ||||||||||||||| ||||| | | |||||||| || | || || |||||||| || Sbjct 556795 AATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATT 556736 Query 43951 CGGATCGTCTTTATAAAGATTAACACCTTCTTCAACAAACATAACAAGCTTAGGGAAAAT 44010 |||||| | | || ||| || |||| || || | | ||||| || ||||| || Sbjct 556735 CGGATCTTTCGAACTAAAATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGAT 556676 Query 44011 AGGAGTTATCCCATCACGACCAAGACCTTTAATACGATTTTTCAGAATTGCTTTCTGAAT 44070 | ||| || | ||| ||| | |||||| || | | | || |||||||||| || || Sbjct 556675 GGCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTGGAT 556616 Query 44071 CATTCGTTCAGTCCAGTCAGTTCCTGTACCAAATGTAATTGTTACAAAAGGTGTTTGTCC 44130 | || | || |||||| |||||| | |||||||||||||||||| || Sbjct 556615 TTTACGGCTATATGTATCTGTTCCTAATCCAAATCCTAATGTTACAAAAGGTGTTTGACC 556556 Query 44131 GTTTGAACTAAAGAGAGTATTTACTTCATATTCATAAGCTT 44171 ||||| || | | || || | ||||||||| ||| ||| Sbjct 556555 ATTTGATGTATACAATGTGTTAATTTCATATTC-TAAACTT 556516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538723358707680