Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq46 138 1e-27 >seq46 Length=4728336 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| | | ||| | || | ||||| || ||||||||||| || |||||||| Sbjct 1481054 ATACCTCCTCTCAACCTGAGAACCAAATGCAAAGTCGATTCCTTTTGAATGTTATAATCT 1481113 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || ||| || | ||||||||| || | |||| | |||||||| || Sbjct 1481114 GAGAGCGTACGCCCATCCTCGAGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGGTCTGGG 1481173 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||||||||| ||||| ||||| ||||| ||| | ||||| || | |||| Sbjct 1481174 GGAATGCCTTCTTTGTCTTGTATTTTAGCTTTGACATTTTCAATAGTGTCTGATGGCTCG 1481233 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| | ||| | || || |||||||||||||| ||||||||||||||| Sbjct 1481234 ACTTCTAAAGTTATGGTCTTTCCGGTTAGAGTTTTAACAAAAATTTGCATC 1481284 Score = 138 bits (152), Expect = 1e-27 Identities = 160/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 |||||||| || || || |||||||| ||||| || ||||| || | |||| | | Sbjct 1481525 CTCAACACAAGGTGGAGGGTTGATTCTTTTTGAATGTTATAGTCAGAAAGGGTTCGACCA 1481584 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || | |||||||| ||| | ||||| | ||||| || || || || ||||||||| Sbjct 1481585 TCTTCAAGCTGTTTTCCAGCGAAAATCAACCTCTGCTGATCTGGGGGGATTCCTTCTTTA 1481644 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| || ||| |||| ||| | |||||||||| ||| ||||| || |||| Sbjct 1481645 TCTTGGATCTTTGCCTTGACATTTTCAATAGTGTCGGAAGGCTCTACTTCAAGTGTAATA 1481704 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || |||||||||| ||| ||||| || || |||||| Sbjct 1481705 GTCTTGCCGGTTAAAGTCTTTACGAAGATCTGCATC 1481740 Score = 122 bits (134), Expect = 8e-23 Identities = 168/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 45109 TTATT--CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATA 45166 ||||| ||||| ||||| |||| || || || || || ||||| || || ||||| || Sbjct 1479910 TTATTGGCCTCCTCGGAGTCTCAGTACGAGGTGGAGAGTAGATTCTTTCTGAATATTGTA 1479969 Query 45167 ATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTC 45226 |||| || || | ||| |||| ||| || || || | || | | |||||| || Sbjct 1479970 ATCGGAGAGTGTACGACCATCTTCCAGTTGCTTGCCGGCAAAGATGAGCCTTTGCTGATC 1480029 Query 45227 CGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGA 45286 || ||||| |||||||||||||| ||||| ||| | ||| | ||| || || | Sbjct 1480030 TGGGGGAATTCCTTCTTTATCTTGGATTTTGGCTTTTACGTTTTCAATGGTATCTGATGG 1480089 Query 45287 CTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||||||||||| | |||||||| || | ||| || || || || ||||| Sbjct 1480090 CTCGACTTCGAGAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATCTGCAT 1480143 Score = 120 bits (132), Expect = 3e-22 Identities = 167/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || | ||||||||| || ||||| || || ||||| || ||||| || ||||| Sbjct 1480142 ATGCCGCCTCTGAGCCTCAAGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCC 1480201 Query 45171 CTGACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 || || | | || |||||||| ||||| || | || || | |||||||| | Sbjct 1480202 --GAAAGTGTGCGTCCGTCTTCCAATTGCTTTCCAGCAAAAATTAACCTCTGCTGGTCTG 1480259 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | || || ||||| ||||| ||||| || ||||| || | |||||| || | || Sbjct 1480260 GAGGGATCCCTTCCTTATCCTGAATCTTAGCTTTGACATTATCAATGGTGTCAGATGGCT 1480319 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||||| || | || || || |||| |||||| ||||| |||||||| Sbjct 1480320 CGACTTCGAGGGTGATTGTCTTTCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480371 Score = 120 bits (132), Expect = 3e-22 Identities = 167/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| | |||||| || || || || || || ||||| ||||||||||| ||||| Sbjct 1480370 ATACCTCCTCTGAGCCTTAAAACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAATC- 1480428 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | | || ||| || | |||||| || || | ||||||| ||||| || | Sbjct 1480429 -TGATAATGTACGACCATCTTCAAGTTGTTTGCCGGCAAAAATCAATCTCTGCTGATCTG 1480487 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | || || |||||||| ||||||||||| ||| | ||| | || || |||| | Sbjct 1480488 GAGGGATACCTTCTTTGTCTTGAATTTTAGCTTTTACGTTTTCAATTGTATCAGAAGGTT 1480547 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||| | || | ||||| || |||| ||||| ||||| |||||||| Sbjct 1480548 CGACTTCCAAGGTGATTGTTTTCCCTGTTAATGTTTTCACAAAGATTTGCAT 1480599 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || |||||||| | || ||||| || || ||||| || ||||| |||||||| Sbjct 1480598 ATTCCACCACGGAGCCTTAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTATAATCA 1480657 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || ||| || || || || || || | || | | |||||||| || Sbjct 1480658 GAAAGAGTGCGCCCATCTTCTAACTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGT 1480717 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||||||||| |||||||| ||||| ||| | || || || | ||| Sbjct 1480718 GGGATACCTTCTTTATCCTGAATTTTCGCTTTGACATTTTCAATCGTATCCGATGGTTCG 1480777 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | ||| || || |||| |||||| ||||| |||||||| Sbjct 1480778 ACTTCAAGAGTGATCGTCTTTCCTGTTAAAGTTTTCACAAAGATTTGCAT 1480827 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| | |||||||| || || || || || ||||| ||||| ||||| || || Sbjct 1480826 ATACCTCCTCTCAGCCTCAAAACGAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCC 1480885 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || ||| ||||| |||||||| ||| | || || | || || || || Sbjct 1480886 GAAAGAGTGCGTCCATCTTCCAACTGTTTTCCAGCGAAGATTAACCTCTGTTGATCTGGT 1480945 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || |||||||||||||| ||||| || || | ||| | |||||||| | ||| Sbjct 1480946 GGGATGCCTTCTTTATCCTGAATCTTGGCCTTAACATTTTCAATTGTGTCGGATGGTTCG 1481005 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | |||||||| || | ||| ||||| || |||||||| Sbjct 1481006 ACCTCAAGAGTGATGGTTTTGCCTGTCAAAGTCTTTACGAATATTTGCAT 1481055 Score = 107 bits (118), Expect = 2e-18 Identities = 164/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| || | ||||| || ||||| || || ||||| || || || ||||||||| Sbjct 1481282 ATCCCTCCTCGCAATCTCAATACAAGATGGAGGGTAGATTCTTTCTGAATGTTATAATCG 1481341 Query 45171 CTGACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 || || || | || || | ||| |||||||| | ||||| | ||||| || | Sbjct 1481342 --GAAAGTGTTCGGCCGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTG 1481399 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||| || |||||||||||||| || ||| | ||| | || || |||| || Sbjct 1481400 GAGGAATACCCTCTTTATCTTGAATCTTAGCTTTAACATTTTCAATTGTATCAGAAGGCT 1481459 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||| | ||| | || || || || ||||| || || || || ||||| Sbjct 1481460 CGACTTCCAAAGTGATGGTCTTTCCTGTAAGAGTCTTCACGAAGATCTGCAT 1481511 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | ||||||||| || || || || || ||||| || || || || || ||| Sbjct 1463653 ATTCCACCTCTGAGCCTCAAGACAAGGTGAAGTGTCGATTCTTTCTGAATGTTGTAGTCG 1463712 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| || | |||||| || || | || | | |||||| || || Sbjct 1463713 GAAAGAGTTCGACCATCTTCAAGTTGTTTACCGGCAAAGATAAGCCTTTGCTGATCTGGA 1463772 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||||||||| || || || ||| | ||| | ||||| || | || Sbjct 1463773 GGAATACCTTCTTTATCCTGGATCTTAGCTTTCACATTTTCAATTGTGTCAGATGGTTCT 1463832 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | ||||| ||||| || |||| ||||| ||||| |||||||| Sbjct 1463833 ACTTCCAAAGTAATTGTTTTACCAGTTAAGGTTTTAACAAAGATTTGCAT 1463882 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 ||||| || ||||||||||| || |||||||| || ||| || ||| || | ||| Sbjct 1481765 TGCAGAGTCGATTCCTTTTGAATGTTATAATCCGAGAGAGTTCTACCATCCTCAAGTTGC 1481824 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | |||| | ||| ||||| ||||| || |||||||| || || ||||| Sbjct 1481825 TTGCCAGCGAAAATCAGCCTTTGTTGGTCTGGCGGGATACCTTCTTTGTCCTGGATTTTG 1481884 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || | || | || || |||| ||| ||||| | || | ||||| ||||| Sbjct 1481885 GCCTTCACATTCTCAATTGTATCTGAAGGCTCAACTTCCAATGTGATGGTTTTTCCGGTC 1481944 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | |||||| ||||| || ||||| Sbjct 1481945 AAAGTTTTCACAAAGATCTGCAT 1481967 Score = 87.8 bits (96), Expect = 2e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 ||||| || | ||||||||| || ||||| || |||||||| || || || |||||||| Sbjct 1463881 ATTCCGCCTCTGAGCCTCAAGACAAGATGAAGTGTTGATTCTTTCTGAATGTTATAATCC 1463940 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || ||| ||||| |||||||| ||| | || || | || || || || Sbjct 1463941 GAAAGAGTGCGTCCATCTTCCAACTGTTTTCCGGCGAAGATTAACCTCTGTTGATCTGGT 1464000 Query 45231 GGAATGCCTTCTTTATCTTGAATTTT 45256 || |||||||||||||| ||||| || Sbjct 1464001 GGGATGCCTTCTTTATCCTGAATCTT 1464026 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || | ||| |||||||| | ||||| | ||||| || || ||||| || |||||| Sbjct 1463500 TCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGAATACCCTCTTTA 1463559 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 |||||||| || ||| | ||| | ||||| || | || ||||| | || | Sbjct 1463560 TCTTGAATCTTAGCTTTAACATTTTCAATTGTGTCAGATGGTTCTACTTCCAAGGTGATT 1463619 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || |||| ||||| |||||||||||||| Sbjct 1463620 GTTTTACCAGTTAAGGTTTTAACAAAAATTTGCAT 1463654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451995278643920