Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_012784.1 Length=44492 Score E Sequences producing significant alignments: (Bits) Value seq89 95.1 3e-15 >seq89 Length=3091062 Score = 95.1 bits (104), Expect = 3e-15 Identities = 127/170 (75%), Gaps = 10/170 (6%) Strand=Plus/Minus Query 176 AAGCGTTTTATAAAGCTTGT--AAAA--AACATAAGGGCaaaaaaaGGGCAGATTTAAGC 231 ||| |||||||| | |||| |||| ||| ||||| || ||||||||||||| | Sbjct 2303995 AAGGGTTTTATA--GGTTGTTCAAAATTAAC-TAAGGTCAGAAAAAGGGCAGATAGAT-- 2303941 Query 232 TAACTTGGAATGTTTTCGAGTTTTTGAGTTAGTTCTCTATCCATTTTTTCAGTTACATGA 291 ||||||||||| ||||| | ||| | |||| | | | |||| |||||| |||| ||| Sbjct 2303940 TAACTTGGAATATTTTCAAATTTCTAGGTTAACTGTTTGTCCA-TTTTTCTGTTAAATGC 2303882 Query 292 GTATATATGCGAATGGTTGTTTTTTCATCTACATGTCCTACCCTTTTCAT 341 || ||||| |||| || |||||||| || ||| || || |||||||| Sbjct 2303881 GTGTATATTTGAATAGTAGTTTTTTCGTCAGTATGACCAACTCTTTTCAT 2303832 Score = 91.5 bits (100), Expect = 4e-14 Identities = 157/220 (71%), Gaps = 11/220 (5%) Strand=Plus/Minus Query 1299 TTCTTTTTGTGATTGTTTTGTATTCTTGTTCAACACAACACTTACGC-GCTTCCATTTAT 1357 |||||| || || ||| |||| ||||||| ||||||| ||| | || || |||||| Sbjct 2303273 TTCTTTCTGAGAAATTTTAGTATCTTTGTTCATTACAACACATACTCTGCGTC-ATTTAT 2303215 Query 1358 CTGTGTATGGATCTTTATACTTCTCGTAGTATCTGTATTTAGTTTCGTTAtttttgtttt 1417 | |||||| ||||||||||||| || | | ||||||||||| | ||| | || Sbjct 2303214 CCGTGTATAAGTCTTTATACTTCTTATATAAGCGGTATTTAGTTTTGCCTGCTTTATCTT 2303155 Query 1418 taaatttttCAATCCACAT-GTTTATACCTCCTGA----GAGAACGTACGTTC--TGTAA 1470 |||||| ||| |||||| | ||| |||||| | |||||||| |||| | ||| Sbjct 2303154 TAAATTGTTCTGACCACATAATGTATTCCTCCTTACATTTAGAACGTAAGTTCAATATAA 2303095 Query 1471 ATTTGTAAAAAATAATAAGGGTAGGTGG-GCTACCCAAAA 1509 | | || ||||||| |||| || || || ||||||| Sbjct 2303094 AGAT-TAGAAAATAAATAGGGCAGTAGGAACTGCCCAAAA 2303056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142250431668696