Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq157 170 5e-38 >seq157 Length=245904 Score = 170 bits (188), Expect = 5e-38 Identities = 372/557 (67%), Gaps = 0/557 (0%) Strand=Plus/Minus Query 35327 CCGATTATTCCGTGGATCGGCGGCAAGCGGCGCCTTGCAGACCATCTCATTCCGCGCTTT 35386 ||||| | || ||||| ||||| || ||||| || ||| | || | | ||||||||| Sbjct 174992 CCGATACTGCCCTGGATAGGCGGTAAACGGCGGCTGGCAAAACAGATTTTACCGCGCTTT 174933 Query 35387 CCGGCGCACGACTGCTACGTTGAAGTGTTCGCGGGCGGCGCTGCGTTGTATTTCATGCGG 35446 |||||||| ||||||||| || ||| |||| || ||| | | || ||| | Sbjct 174932 CCGGCGCATACCTGCTACGTGGAGCCGTTTTGTGGCGCGGCGGCGCTCTTCTTTATGAAG 174873 Query 35447 CCGCCGGCAAAGGTCGAGGTGATCAACGACGTTAACGGCGAACTGATCAACCTGTATCGC 35506 | || |||| |||||||| ||||| | |||||||| ||| |||| || ||||| Sbjct 174872 TCACCCAGTAAGGCGGAGGTGATTAACGATATCAACGGCGAGCTGGTCAATCTCTATCGG 174813 Query 35507 GTCGTTCAGCATCACCTCGAGGAATTCGTGCGGCAGTTCAAATGGGCGCTCACCAGTCGG 35566 || | | || || || || || || |||| ||||| ||||||||||| ||| ||| Sbjct 174812 GTATTAAAACACCATCTGGAAGAGTTTATGCGCCAGTTTAAATGGGCGCTGGTCAGCCGG 174753 Query 35567 CAGGTGTTCGAGTGGCTGAAGCAGACGGCGCCGGAAACGCTCACCGACATCCAGCGTGCG 35626 | ||| | ||| | || ||| || | || || | ||||| |||||||| || Sbjct 174752 GCGATGTATCAATGGTTAAACATCACGCCGACCGAGACCTTAACCGATATCCAGCGAGCA 174693 Query 35627 GCGCGGTTCTACTATCTGCAGAAAAACTGCTTTGGCGGGATTGTCCACGGGCAGACGTTC 35686 || || ||||| || ||||| ||| | || ||||| | || | ||| || || Sbjct 174692 GCCCGCTTCTATTACCTGCAAAAACAGGCGTTCGGCGGCAAGGTGGCGGAGCACACTTTT 174633 Query 35687 GGCACGGCTACCACTGCGCCGCCGGGTCTGAACTTGCTGCGGATCGAGGAAGAATTATCC 35746 || | ||||||| || ||| | |||||| || | || || || ||||| |||| Sbjct 174632 GGTTTGACTACCACCACGGGGCCACGCCTGAACCTGTTACGCATGGAAGAAGAGCTATCG 174573 Query 35747 GCGGCGCACTTGCGCCTCGCGAGCGCATATATCGAGCGTCTGGACTGGGCGGATTGCATC 35806 || || |||| | | || | || || | ||||| ||||| || || Sbjct 174572 CTCGCTCATCTGCGATTATCACGCACCACCATTGAACACCTGGATTGGGCCAGCTGTATT 174513 Query 35807 GATCGCTATGACCGGCCGCACACGTTGTTCTATCTCGATCCGCCGTATTTCGAGACGCGC 35866 | || |||||||| ||||||||| |||| || ||| |||||||||| | || Sbjct 174512 GCCCGTTATGACCGTCCGCACACGCTGTTTTACTGCGACCCGCCGTATTGGGGAACAGAA 174453 Query 35867 GGCTACGGTGTCGATTT 35883 ||||| || |||||||| Sbjct 174452 GGCTATGGCGTCGATTT 174436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127543476525192