Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq570 113 6e-20 seq105 82.4 9e-11 >seq570 Length=38645 Score = 113 bits (124), Expect = 6e-20 Identities = 171/239 (72%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 12750 CGGTTCGTCGCCGCGATGACAACGATGCC--CGTCTCGTTATCGAAGCCATCCATCTCAG 12807 ||||| || || || || | || |||||| ||| | | | | || |||||||| ||| Sbjct 30083 CGGTTAGTAGCAGCTATCATAATGATGCCTTCGTTT--TCACCAAATCCATCCATTTCAA 30026 Query 12808 TCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCGG-GCATACCACCCGCACTG 12866 || | |||||| | ||||||||||||||||| | | || || ||| |||| Sbjct 30025 CTAATAATTGATTCAATGTTTGTTCACGTTCATCGTGGCCACCGCCGAC-ACCAGCACCA 29967 Query 12867 CGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGG 12926 ||||| || || || ||||||||||||||||||| |||||| || ||||| Sbjct 29966 CGTTGACGTCCAACTGCATCAATTTCGTCAATGAAAATGATACAAGGCGCATTTTTCTTA 29907 Query 12927 GCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAA 12985 ||| |||||| | ||| || || | | ||||||||||| ||||||||||| ||||| Sbjct 29906 GCATTTTCAAATAAATCACGTACACGGCTTGCACCGACACCAACAAACATCTCAACAAA 29848 >seq105 Length=1502237 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 116473 GTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGA 116532 || || |||| ||||| ||||| | ||| || |||||||||||||| |||| ||| Sbjct 285626 GTATATTCTACTATTTCTGTACAAAGATTGCTACATTTAATGGTGCCCAAATTCTGTTGG 285567 Query 116533 TTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGG 116592 || || ||| |||| |||||||| ||||| ||||| || || || || ||| || Sbjct 285566 TTGGATTTTCTGTTGCACGCATCTTTGTACAGCATGTAAGGAACACCGGTTTCCACCTGA 285507 Query 116593 GACTTGAGAATAGCCTTCCA 116612 |||| | ||||| ||||| Sbjct 285506 GACTCAATTATAGCATTCCA 285487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613496448286320