Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_013594.1 Length=37235 Score E Sequences producing significant alignments: (Bits) Value seq157 300 4e-77 >seq157 Length=245904 Score = 300 bits (332), Expect = 4e-77 Identities = 454/638 (71%), Gaps = 11/638 (2%) Strand=Plus/Minus Query 36004 CCAGATTGTTGGCTATGGTTCAAAGGAGCTGCGCGTTGAAACCATATCCTGCTGGCTGGC 36063 |||||||||||| || || ||| | || |||| || |||||||| ||||||||||||| Sbjct 46074 CCAGATTGTTGGATACGGCTCACACGAATTGCGGGTAGAAACCATCGCCTGCTGGCTGGC 46015 Query 36064 CCGCACAATTATTCAGACAAA---GCACTATTCCCGCCGTTTTGTGAATAACTCTTACCT 36120 ||||| ||| | |||| ||| ||| ||| || ||||| ||||| || | || Sbjct 46014 CCGCATCATTGTA---ACAAGTCGGCATTATAGCCGGCGGTTTGTTAATAATTCCTGGCT 45958 Query 36121 CCACCTGGGAGTATTCAGCGGACGCGATCTGGTTGGCGTTCTCCAGTGGGGATATGCCCT 36180 || || || |||||| ||| | | | |||||||||| | ||||||||||| ||||| Sbjct 45957 ACATCTTGGGGTATTCTCCGGTAGGGCTTTGGTTGGCGTGATGCAGTGGGGATACGCCCT 45898 Query 36181 TAACCCCAACTCAGGTCGTCGTGTCGTGCTTGAAACGGATAACCGGGGCTATATGGAGTT 36240 || || ||| || || || || |||| || || | ||||||||| | Sbjct 45897 GAATCCTAACAGTGGCGCAAAAGTAGTCTCTGGCACGGGGAATCGTGAGTATATGGAGCT 45838 Query 36241 GAACCGCATGTGGCTACACGACGACATGCCCCGCAACTCTGAATCACGGGCCATCAGTTA 36300 |||||| | ||||| || || |||||||| || || || ||||| || ||||| || Sbjct 45837 TAACCGCTTATGGCTGCATGATGACATGCCTAAAAATTCAGAGTCACGAGCGATCAGCTA 45778 Query 36301 TGCACTGAAAACCATAAGGTTACTGTATCCGTCAG-TGGAGTGGGTTCAGTCTTTTGCAG 36359 |||||||||||| || || ||||| ||||| |||| || | ||||| || || ||||||| Sbjct 45777 TGCACTGAAAACTATCAGATTACTTTATCC-TCAGGTGCAATGGGTGCAATCCTTTGCAG 45719 Query 36360 ACGAACGCTGCGGACGTGCTGGCGTTGTGTATCAGGCGTCAAATTTTGATTTTATTGGCA 36419 | || ||||| || ||| |||||| |||||||||||| || ||||| | ||| |||| Sbjct 45718 ATGAGCGCTGTGGGCGTTGTGGCGTGGTGTATCAGGCGAGTAA-TTTGAATATATCGGCA 45660 Query 36420 GCCATGAAAGCACG-TTCTACGAGCTGGATGGTGAGTGGTATCACGAGATAACGATGAAC 36478 ||||| | | || ||||| ||||| |||||||||||||||||||| ||| | ||| Sbjct 45659 GCCAT-TACTCGCGATTCTATGAGCTTGATGGTGAGTGGTATCACGAAATAGCCCGCAAC 45601 Query 36479 GCAATTAAGCGCGGTGGACAACGAGGCATGTATTTACGGGCTAATAAAGAGCGTGCCGTG 36538 || || | ||| || || | ||||| || | |||| |||| ||||||||| Sbjct 45600 GCGATCACGCGGGGCGGCAAGCGAGGAGAATACCTGAGGGCCAATATAGAGCGTGCAACT 45541 Query 36539 GTGCACAAATTTAATCAGTATCGCTACATCAGGTTCCTGAACAAGCGAGCAAGAAAGCGG 36598 || || || | |||| || || ||| | || || |||| || || | ||||| Sbjct 45540 GTTCATCGCTTCCAGCAGTTCCGATATATCCGCTTTTTGGACAAACGCGCGAAGAAGCGC 45481 Query 36599 CTAAATACCAAACTATTCAGGATTCAGCCATACCCAAA 36636 || ||||| ||| |||| | | ||||| || || || Sbjct 45480 CTCAATACAAAATTATTTAAAGTGCAGCCTTATCCTAA 45443 Score = 300 bits (332), Expect = 4e-77 Identities = 454/638 (71%), Gaps = 11/638 (2%) Strand=Plus/Plus Query 36004 CCAGATTGTTGGCTATGGTTCAAAGGAGCTGCGCGTTGAAACCATATCCTGCTGGCTGGC 36063 |||||||||||| || || ||| | || |||| || |||||||| ||||||||||||| Sbjct 48964 CCAGATTGTTGGATACGGCTCACACGAATTGCGGGTAGAAACCATCGCCTGCTGGCTGGC 49023 Query 36064 CCGCACAATTATTCAGACAAA---GCACTATTCCCGCCGTTTTGTGAATAACTCTTACCT 36120 ||||| ||| | |||| ||| ||| ||| || ||||| ||||| || | || Sbjct 49024 CCGCATCATTGTA---ACAAGTCGGCATTATAGCCGGCGGTTTGTTAATAATTCCTGGCT 49080 Query 36121 CCACCTGGGAGTATTCAGCGGACGCGATCTGGTTGGCGTTCTCCAGTGGGGATATGCCCT 36180 || || || |||||| ||| | | | |||||||||| | ||||||||||| ||||| Sbjct 49081 ACATCTTGGGGTATTCTCCGGTAGGGCTTTGGTTGGCGTGATGCAGTGGGGATACGCCCT 49140 Query 36181 TAACCCCAACTCAGGTCGTCGTGTCGTGCTTGAAACGGATAACCGGGGCTATATGGAGTT 36240 || || ||| || || || || |||| || || | ||||||||| | Sbjct 49141 GAATCCTAACAGTGGCGCAAAAGTAGTCTCTGGCACGGGGAATCGTGAGTATATGGAGCT 49200 Query 36241 GAACCGCATGTGGCTACACGACGACATGCCCCGCAACTCTGAATCACGGGCCATCAGTTA 36300 |||||| | ||||| || || |||||||| || || || ||||| || ||||| || Sbjct 49201 TAACCGCTTATGGCTGCATGATGACATGCCTAAAAATTCAGAGTCACGAGCGATCAGCTA 49260 Query 36301 TGCACTGAAAACCATAAGGTTACTGTATCCGTCA-GTGGAGTGGGTTCAGTCTTTTGCAG 36359 |||||||||||| || || ||||| ||||| ||| ||| | ||||| || || ||||||| Sbjct 49261 TGCACTGAAAACTATCAGATTACTTTATCC-TCAGGTGCAATGGGTGCAATCCTTTGCAG 49319 Query 36360 ACGAACGCTGCGGACGTGCTGGCGTTGTGTATCAGGCGTCAAATTTTGATTTTATTGGCA 36419 | || ||||| || ||| |||||| |||||||||||| || ||||| | ||| |||| Sbjct 49320 ATGAGCGCTGTGGGCGTTGTGGCGTGGTGTATCAGGCGAGTAA-TTTGAATATATCGGCA 49378 Query 36420 GCCATGAAAGCACG-TTCTACGAGCTGGATGGTGAGTGGTATCACGAGATAACGATGAAC 36478 ||||| | | || ||||| ||||| |||||||||||||||||||| ||| | ||| Sbjct 49379 GCCAT-TACTCGCGATTCTATGAGCTTGATGGTGAGTGGTATCACGAAATAGCCCGCAAC 49437 Query 36479 GCAATTAAGCGCGGTGGACAACGAGGCATGTATTTACGGGCTAATAAAGAGCGTGCCGTG 36538 || || | ||| || || | ||||| || | |||| |||| ||||||||| Sbjct 49438 GCGATCACGCGGGGCGGCAAGCGAGGAGAATACCTGAGGGCCAATATAGAGCGTGCAACT 49497 Query 36539 GTGCACAAATTTAATCAGTATCGCTACATCAGGTTCCTGAACAAGCGAGCAAGAAAGCGG 36598 || || || | |||| || || ||| | || || |||| || || | ||||| Sbjct 49498 GTTCATCGCTTCCAGCAGTTCCGATATATCCGCTTTTTGGACAAACGCGCGAAGAAGCGC 49557 Query 36599 CTAAATACCAAACTATTCAGGATTCAGCCATACCCAAA 36636 || ||||| ||| |||| | | ||||| || || || Sbjct 49558 CTCAATACAAAATTATTTAAAGTGCAGCCTTATCCTAA 49595 Score = 170 bits (188), Expect = 5e-38 Identities = 276/393 (70%), Gaps = 8/393 (2%) Strand=Plus/Plus Query 35135 GATTGGCTATGTAAGGGTATCAACAAATGACCAGAATACAGACCTGCAACGAAACGCTCT 35194 ||| |||||| | ||||| |||| ||||||||| || || || | || | ||| | || Sbjct 192203 GATAGGCTATATGAGGGTGTCAAAAAATGACCAAAACACCGATTTACAGCAAAAATC-CT 192261 Query 35195 TG-TTTGTGCAGGATGTGAACAAATATTTGAAGATAAATTAAGCGGAACAAGGACAGAC- 35252 || |||| ||| ||||| ||||| ||||| |||||| | || |||| || ||||| Sbjct 192262 TGATTTGCGCAAATTGTGAGCAAATTTTTGAGGATAAAATCAGTGGAAAAA---CAGACC 192318 Query 35253 --AGACCTGGATTAAAACGCGCGTTAAAGCGCCTTCAAAAAGGTGACACACTGGTTGTCT 35310 ||||| |||||||||||||||||||| |||| || || || |||||||| |||| Sbjct 192319 AGAGACCCGGATTAAAACGCGCGTTAAACTGCCTGAAATCGGGCGATACACTGGTGGTCT 192378 Query 35311 GGAAACTGGATCGCCTCGGGCGAAGCATGAAACATCTGATTTCCCTCGTCGGGGAACTAC 35370 |||| || ||| | || || |||||||| |||||| ||||| | | | |||| Sbjct 192379 GGAAGCTCGATAGGCTGGGTCGAAGCATTAAACATTTGATTACTTTAATATCCAAACTGG 192438 Query 35371 GGGAGCGAGGGATTAATTTTCGCAGTCTTACCGACAGCATAGACACATCTTCTCCAATGG 35430 || ||| || |||||| || | || || | ||| || || ||| | | | Sbjct 192439 AAGATGAAGGCATCCATTTTCATAGCTTGACGGATACCATTGATACCTCTACGTCCGCAG 192498 Query 35431 GGCGTTTTTTCTTCCACGTTATGGGTGCCCTGGCTGAAATGGAACGAGAACTAATCATCG 35490 | |||||||||||||| || ||| | || |||| ||||||| || ||||| || | | Sbjct 192499 GCCGTTTTTTCTTCCATGTGATGAGCGCGTTGGCACAAATGGAGCGGGAACTCATTGTTG 192558 Query 35491 AGCGAACGATGGCTGGACTTGCTGCCGCCAGAA 35523 |||| || ||| || | || || || |||| Sbjct 192559 AGCGTACTCAGGCAGGTTTAGCCGCAGCAAGAA 192591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119028418292628