Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_013599.1 Length=36674 Score E Sequences producing significant alignments: (Bits) Value seq157 187 6e-43 >seq157 Length=245904 Score = 187 bits (206), Expect = 6e-43 Identities = 192/251 (76%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 7389 TCGGCGACGTTGCTCAGGTCCTCGAAGTCCTCCACGCTGGCCACACCGCCTCCAGCGAAC 7448 || ||| | | ||||| | ||||||||| ||| | ||||| |||||||||||||| Sbjct 218139 TCAGCGCCTTCGCTCATATTCTCGAAGTCATCCGGCGTCGCCACGCCGCCTCCAGCGAAG 218198 Query 7449 GCCTCACCATCACGCAAGAACTGCACGCCACCCAGCGAAGCGTTAATCCGCTTGCCGTAG 7508 || |||||||| || ||||||| || ||||| |||||||||||||| || ||||| | Sbjct 218199 GCGTCACCATCGCGGCAGAACTGAACTCCACCGAGCGAAGCGTTAATACGTTTGCCAAAA 218258 Query 7509 TTGTTGTCCTGCGCCCAGAGTTCTATGTTGGCGTTGACGTAGCATCCGGCATACGGCCTG 7568 ||||| ||| |||||||| || ||| ||||||| || ||||| || |||||| || || Sbjct 218259 TTGTTATCCATCGCCCAGATATCGATGGTGGCGTTAACATAGCAACCTGCATACTGCTTG 218318 Query 7569 CCGTCCTGCGCGGTGAGCGGGGTCCGGTCACGGTCGACCACCAGTGGCCGTGCCTTGTTA 7628 || || ||||| |||| || || |||||||||| |||||||| || || || ||| Sbjct 218319 CCATCGGCGGCGGTCAGCGCGGAACGATCACGGTCGATAACCAGTGGTCGGGCTTTATTA 218378 Query 7629 CGCGCAGAGAC 7639 | || ||||| Sbjct 218379 CTGGCGGAGAC 218389 Score = 98.7 bits (108), Expect = 2e-16 Identities = 289/443 (65%), Gaps = 2/443 (0%) Strand=Plus/Plus Query 5051 CAGGTTGTGCGGCTGAAACAGCCGCCCCGCCCACCGTCCGGTGCGACTGGCCCCGTTGAA 5110 |||||| || || || || |||||||| ||||||| || || || || || || Sbjct 217045 CAGGTTTTGGGGTTGGAAAAGCCGCCCAGCCCACCTGCCTGTTCGTGATGCGCCACAAAA 217104 Query 5111 TTGCAGCGTGCCGCGCAGGCGGCCATCGCGGCTGGTGCAGTTCAGCAGCGCCTGATACTT 5170 ||||||||||||||| || |||||||| | ||| | | || | | | ||| || Sbjct 217105 TTGCAGCGTGCCGCGAAGACGGCCATCACTGCTAACTGATCTGAGTAAAGTTTTATATTT 217164 Query 5171 AGCGGTGCTGGTGGTGCTGGCTTGCCTGCGGATGGACAGCAGTTCCCGCACCGTCTCTGG 5230 | ||||||||||| |||||||||| ||| || | ||| ||||| ||| | ||| Sbjct 217165 ACTGGTGCTGGTGGCGCTGGCTTGCAGGCGTATTGCCAGTAGTTCTTTCACTGCTGGTGG 217224 Query 5231 CAACAGCGGATCGTCAAGGCAACGCTCTACCGTGTGTTGCTGCATGTCCGGCAACGCCAC 5290 || || || | | || || | ||| || ||||| || ||||| | ||| Sbjct 217225 TAATTCGGGGTCTGATATTCGGCGTTCCAGTGTGCTTTTTTGCATATCAGGCAAAGTCAC 217284 Query 5291 GCCGTGCGCGGTGCTCAGGTGGTGTAACAGTGCATCGCGCTGGGTTGCCGCCTGCACCAC 5350 |||| | | | || || | ||||| |||||||| || |||| || ||||| | Sbjct 217285 ACCGTAGGACTCGATGAGATGTTTTAACATGGCATCGCGTTGAGTTGTGGCTTGCACTTC 217344 Query 5351 TCCTGCTGTGAGGTCACTGGTGCGCTCGGCCAATGCTTGCTTG-GCGCGTTCCACAGCGC 5409 || | || | || || || || | || || | ||| || | || ||||| | Sbjct 217345 CCCCTCAGTTATATCGAGAGTACGTTCTG-AAAGGCGTTTTTGCGCTCTGTCTACAGCAC 217403 Query 5410 CGATGGCGGCCTGCGCTAAGTCCGTATCGACCAGAACGCCTCGGTCATTAATAGTTTGGT 5469 ||||| | || | | ||| |||| | ||||| ||| || ||||||||| || | Sbjct 217404 GAATGGCCCCGTGGACAAGATCCATATCAATCAGAAAGCCGCGATCATTAATACGCTGAT 217463 Query 5470 CCAGAAACCACAGCGCCAGCTCC 5492 | || ||| |||||||| ||| Sbjct 217464 CACGATGCCAGAGCGCCAGTTCC 217486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117233248180464