Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq46 131 4e-25 seq69 84.2 5e-11 >seq46 Length=4728336 Score = 131 bits (144), Expect = 4e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || || |||||||| || ||||| || || || |||| ||| || |||| | ||| Sbjct 1480607 CGGAGCCTTAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTATAATCAGAAAGAGTG 1480666 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| | |||||| ||||| |||||||| | ||||||||| || || ||| Sbjct 1480667 CGCCCATCTTCTAACTGCTTACCGGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCT 1480726 Query 199529 TCTCGCTCCTGAATCTTTTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| |||||||| ||| |||| || ||| | || || | || ||| || || | Sbjct 1480727 TCTTTATCCTGAAT-TTTCGCTTTGACATTTTCAATCGTATCCGATGGTTCGACTTCAAG 1480785 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || || | |||||||||||| ||||| Sbjct 1480786 AGTGATCGTCTTTCCTGTTAAAGTTTTCACAAAGATTTG 1480824 Score = 131 bits (144), Expect = 4e-25 Identities = 164/222 (74%), Gaps = 5/222 (2%) Strand=Plus/Minus Query 199415 CTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCA 199474 |||| ||||||||||| || || || ||||||| ||||||||||| | || | ||| Sbjct 1570243 CTCAAAACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGCGTACGACCA 1570184 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 || || |||||||||||||||||||| | | ||||||||| || ||||||||| Sbjct 1570183 TCCTCGAGCTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGAATTCCTTCCTTG 1570124 Query 199535 TCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || ||| || || || || | |||||| | || || || ||||| ||||| Sbjct 1570123 TCTTGGAT-TTTAGCTTTGACATTGTCAATGGTGTCCGATGGCTCAACTTCCAAAGTGAT 1570065 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||||| || || ||||| ||||| || || || |||||| Sbjct 1570064 TGTCTTTCCAGTAAGAGTCTTCACGAAGATCTG---CATTTT 1570026 Score = 125 bits (138), Expect = 2e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 || ||| || || || | |||||| || || || ||||||| ||||||||||| | ||| Sbjct 1570478 TCTAAGCCTAAGCACCAAGTGGAGGGTTGATTCTTTTTGGATGTTGTAGTCAGAAAGAGT 1570419 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | |||||| || ||||||||||| || ||||| | | ||||||||| || |||||| Sbjct 1570418 ACGTCCATCCTCGAGCTGCTTTCCTGCAAAGATCAATCTCTGCTGGTCTGGGGGAATTCC 1570359 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| || || ||||| ||| || || | ||| || | || ||| || ||||| Sbjct 1570358 TTCCTTGTCTTGGATCTTAGCCTTGACATTCTCAATGGTATCGGATGGTTCAACTTCCAA 1570299 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || || ||||| || || || Sbjct 1570298 GGTGATGGTCTTTCCAGTAAGGGTCTTCACGAAGATCTG 1570260 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || |||| |||||| || ||||| || || || |||| |||||| || | | || | | Sbjct 1480154 AGCCTCAAGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAATCCGAAAGTGTGCGT 1480213 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || ||||||| |||||||| || || || | | ||||||||| ||| || ||||| Sbjct 1480214 CCGTCTTCCAATTGCTTTCCAGCAAAAATTAACCTCTGCTGGTCTGGAGGGATCCCTTCC 1480273 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||||||||| || || || | |||||| | || || || || | ||| Sbjct 1480274 TTATCCTGAATCTTAGCTTTGACATTATCAATGGTGTCAGATGGCTCGACTTCGAGGGTG 1480333 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || | |||||||||||| ||||| Sbjct 1480334 ATTGTCTTTCCTGTTAAAGTTTTCACAAAGATTTG 1480368 Score = 105 bits (116), Expect = 2e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| |||||||| || ||||||||||| || || || || | ||||| || | | || Sbjct 1479922 TCGGAGTCTCAGTACGAGGTGGAGAGTAGATTCTTTCTGAATATTGTAATCGGAGAGTGT 1479981 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | ||||||||||| ||||| ||||| |||||||| | ||||| || || |||||| Sbjct 1479982 ACGACCATCTTCCAGTTGCTTGCCGGCAAAGATGAGCCTTTGCTGATCTGGGGGAATTCC 1480041 Query 199528 TTCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 |||| || || || ||| || || ||| ||| | ||| |||| || || || || | Sbjct 1480042 TTCTTTATCTTGGAT-TTTGGCTTTTACGTTTTCAATGGTATCTGATGGCTCGACTTCGA 1480100 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || | ||| || || || || || Sbjct 1480101 GAGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATCTG 1480140 Score = 100 bits (110), Expect = 7e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480 ||||||||||| || || || ||||||| ||||| || | || || | |||||||| Sbjct 1480391 ACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAATCTGATAATGTACGACCATCTTCA 1480450 Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGA 199540 || || || ||||| || || | | |||||| || ||| || |||||| || ||| Sbjct 1480451 AGTTGTTTGCCGGCAAAAATCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGA 1480510 Query 199541 ATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTT 199599 || ||| || || ||| ||| | || || | | ||| || ||||| ||||| || || Sbjct 1480511 AT-TTTAGCTTTTACGTTTTCAATTGTATCAGAAGGTTCGACTTCCAAGGTGATTGTTTT 1480569 Query 199600 ACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || | ||||||||||| ||||| Sbjct 1480570 CCCTGTTAATGTTTTCACAAAGATTTG 1480596 Score = 100 bits (110), Expect = 7e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || |||| || ||||| || || || || ||||| | |||||||| | | ||| | | Sbjct 1480838 AGCCTCAAAACGAGGTGAAGGGTGGATTCTTTTTGAATATTGTAGTCCGAAAGAGTGCGT 1480897 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||||| ||| ||||| |||||||| | | ||| || || || || |||||| Sbjct 1480898 CCATCTTCCAACTGTTTTCCAGCGAAGATTAACCTCTGTTGATCTGGTGGGATGCCTTCT 1480957 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||||||||| ||| || ||| | ||||| | || ||| || || | ||| Sbjct 1480958 TTATCCTGAATCTTGGCCTTAACATTTTCAATTGTGTCGGATGGTTCGACCTCAAGAGTG 1481017 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || | ||| || || || ||||| Sbjct 1481018 ATGGTTTTGCCTGTCAAAGTCTTTACGAATATTTG 1481052 Score = 98.7 bits (108), Expect = 2e-15 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 |||||| |||||||| | ||| || || | | || | ||||| || || || ||||| Sbjct 1481086 AGTCGATTCCTTTTGAATGTTATAATCTGAGAGCGTACGCCCATCCTCGAGTTGTTTTCC 1481145 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 ||| || || || | ||||||||| || ||| |||||| || || || ||| |||| Sbjct 1481146 GGCAAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCTTTGTCTTGTAT-TTTAGCTT 1481204 Query 199552 C-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAG 199610 || ||| | ||||||| || || || || || || || ||||| || || |||| Sbjct 1481205 TGACATTTTCAATAGTGTCTGATGGCTCGACTTCTAAAGTTATGGTCTTTCCGGTTAGAG 1481264 Query 199611 TTTTCACAAAAATTTG 199626 |||| ||||||||||| Sbjct 1481265 TTTTAACAAAAATTTG 1481280 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| |||||||| |||||||| | ||| || || | | ||| || ||||| Sbjct 1481756 AGGACCAAGTGCAGAGTCGATTCCTTTTGAATGTTATAATCCGAGAGAGTTCTACCATCC 1481815 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| || ||||| || || | || ||||| || || |||||| ||| Sbjct 1481816 TCAAGTTGCTTGCCAGCGAAAATCAGCCTTTGTTGGTCTGGCGGGATACCTTCTTTGTCC 1481875 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || |||||| || | || |||| | || || ||||| ||||| || Sbjct 1481876 TGGATTTTGGCCTTCACATTCTCAATTGTATCTGAAGGCTCAACTTCCAATGTGATGGTT 1481935 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | |||||||||||| || || Sbjct 1481936 TTTCCGGTCAAAGTTTTCACAAAGATCTG 1481964 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||||||||||| || || || ||||| | ||| ||||||| | || | || Sbjct 1481524 TCTCAACACAAGGTGGAGGGTTGATTCTTTTTGAATGTTATAGTCAGAAAGGGTTCGACC 1481583 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| ||||| ||||| ||||| || | | |||||| || || ||||||||| Sbjct 1481584 ATCTTCAAGCTGTTTTCCAGCGAAAATCAACCTCTGCTGATCTGGGGGGATTCCTTCTTT 1481643 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || |||||| ||| || ||| | ||||| | | ||||| || | || || Sbjct 1481644 ATCTTGGATCTTTGCCTTGACATTTTCAATAGTGTCGGAAGGCTCTACTTCAAGTGTAAT 1481703 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || | ||| || || || || || Sbjct 1481704 AGTCTTGCCGGTTAAAGTCTTTACGAAGATCTG 1481736 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 |||||||||||||| ||||||||||||||| | ||| | | ||||| ||| | |||||| Sbjct 1463981 ATCTTCGCCGGAAAACAGTTGGAAGATGGACGCACTCTTTCGGATTATAACATTCAGAAA 1463922 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACT 201026 || || || ||||| ||||| ||||| || Sbjct 1463921 GAATCAACACTTCATCTTGTCTTGAGGCT 1463893 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || ||||| || |||||||| || || || | | |||||| || ||| ||| || ||| Sbjct 1463497 CCGTCTTCAAGTTGCTTTCCTGCAAAAATCAACCTCTGCTGATCTGGAGGAATACCCTCT 1463556 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || |||||||| || || ||| | ||||| | || |||||| ||||| ||| Sbjct 1463557 TTATCTTGAATCTTAGCTTTAACATTTTCAATTGTGTCAGATGGTTCTACTTCCAAGGTG 1463616 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || | ||||| ||||||||||| Sbjct 1463617 ATTGTTTTACCAGTTAAGGTTTTAACAAAAATTTG 1463651 >seq69 Length=2547145 Score = 84.2 bits (92), Expect = 5e-11 Identities = 132/188 (70%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| |||| ||||||||| | | |||||| || ||||| |||||||| |||||||| Sbjct 1551503 CCTTTCTGGATGTTGTAGTCCGAAAGAGTCCTGCCGTCTTCGAGCTGCTTCCCGGCGAAA 1551562 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || | | ||| |||||||| || || || || || ||||| || || | Sbjct 1551563 ATCAACCTCTGTTGGTCCGGTGGGATACCCTCCTTATCTTGGATCTTGGCTTTGACATTT 1551622 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 || | ||||| | || || || | ||||| ||||| ||||| || || |||||| Sbjct 1551623 TCAATTGTGTCAGACTGCTCGACCTCAAGGGTGATTGTCTTGCCCGTTAGGGTCTTCACA 1551682 Query 199619 AAAATTTG 199626 ||||| || Sbjct 1551683 AAAATCTG 1551690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178900422883934