Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq46 102 9e-17 seq69 89.7 6e-13 >seq46 Length=4728336 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || |||||||| |||||||| || ||||| || | || ||||||||||| || || || Sbjct 1570447 TCTTTTTGGATGTTGTAGTCAGAAAGAGTACGTCCATCCTCGAGCTGCTTTCCTGCAAAG 1570388 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | ||||||||| | || | | |||||||| |||||| ||||| || Sbjct 1570387 ATCAATCTCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTC 1570328 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || ||| | ||| || |||| |||||||| || || || || || || || Sbjct 1570327 TCAATGGTATCGGATGGTTCAACTTCCAAGGTGATGGTCTTTCCAGTAAGGGTCTTCACG 1570268 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 1570267 AAGATCTGCAT 1570257 Score = 96.9 bits (106), Expect = 4e-15 Identities = 162/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| || | ||| || || || | || || |||||||| |||||||| || Sbjct 1570255 CCTCCTCTCAACCTCAAAACAAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAA 1570196 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || | || ||||||||||| |||||||| ||||| | ||||||||| | || Sbjct 1570195 AGCGTACGACCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCTCTGCTGGTCTGGGGGA 1570136 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT---TCC 46543 | | |||||||| ||| || |||| | | | ||||| |||| || Sbjct 1570135 ATTCCTTCCTTGTCTTGGATTTTAGCTTTGACATTGTCAATGGTGTC---CGATGGCTCA 1570079 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || |||| ||||| || || || || || || || || ||||| |||||||| Sbjct 1570078 ACTTCCAAAGTGATTGTCTTTCCAGTAAGAGTCTTCACGAAGATCTGCATTTT 1570026 >seq69 Length=2547145 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/194 (71%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 46404 CCTTT-TGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||| || ||||| | |||| ||||||||||| |||||||| Sbjct 1551503 CCTTTCTGGATGTTGTAGTCCGAAAGAGTCCTGCCGTCTTCGAGCTGCTTCCCGGCGAAA 1551562 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | ||| ||||| | || | | |||||| || |||||| |||| | Sbjct 1551563 ATCAACCTCTGTTGGTCCGGTGGGATACCCTCCTTATCTTGGATCTTGGCTTTGACATTT 1551622 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| | || || || | ||||| || |||||||| || || || ||| Sbjct 1551623 TCAATTGTGTCAGACTGCTCGACCTCAAGGGTGATTGTCTTGCCCGTTAGGGTCTTCACA 1551682 Query 46583 AAGATTTGCATTTT 46596 || || ||||| || Sbjct 1551683 AAAATCTGCATCTT 1551696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565228494197040