Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq46 102 6e-17 >seq46 Length=4728336 Score = 102 bits (112), Expect = 6e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| ||| | || |||||||||||||| ||| ||||| || |||||||| | Sbjct 1481057 CCTCCTCTCAACCTGAGAACCAAATGCAAAGTCGATTCCTTTTGAATGTTATAATCTG-- 1481114 Query 39553 AAAACG--CGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610 | | || || |||| || | |||||| ||| ||||||| | | |||||| || | || Sbjct 1481115 AGAGCGTACGCCCATCCTCGAGTTGTTTTCCGGCAAAAATCAGCCTCTGCTGGTCTGGGG 1481174 Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | | |||||||||||| |||||| ||| | | | | ||||||| || | Sbjct 1481175 GAATGCCTTCTTTGTCTTGTATTTTAGCTTTGACATTTTCAATAGTGTCTGATGGCTCGA 1481234 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || ||||| || || || || |||| |||||| || || || ||||| Sbjct 1481235 CTTCTAAAGTTATGGTCTTTCCGGTTAGAGTTTTAACAAAAATTTGCAT 1481283 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 ||||||||| ||||| ||||| | || || |||| || | |||||| ||| |||| Sbjct 1480408 TTCTTTTTGGATATTGTAATCTGATAATGTACGACCATCTTCAAGTTGTTTGCCGGCAAA 1480467 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGT 39647 ||| || | ||||||||| | || | ||||||||||| ||||| ||| | | Sbjct 1480468 AATCAATCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGAATTTTAGCTTTTACGTT 1480527 Query 39648 CGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTAC 39707 | | ||| || | ||| || ||||| || |||||||| || ||||| ||||| || Sbjct 1480528 TTCAATTGTATCAGAAGGTTCGACTTCCAAGGTGATTGTTTTCCCTGTTAATGTTTTCAC 1480587 Query 39708 GAAGATCTGCAT 39719 ||||| ||||| Sbjct 1480588 AAAGATTTGCAT 1480599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347363664539066