Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_014036.1 Length=174436 Score E Sequences producing significant alignments: (Bits) Value seq157 127 2e-24 seq89 86.0 7e-12 >seq157 Length=245904 Score = 127 bits (140), Expect = 2e-24 Identities = 559/874 (64%), Gaps = 22/874 (3%) Strand=Plus/Minus Query 152917 TTGCCCGTGCATATATCGAATATCGTCATGATCGTGATATCGCCCGTGAACAAAACGGAA 152976 |||| ||| | || || || || ||||| ||||||||| ||||||| |||||| | | Sbjct 54065 TTGCGCGTACCTACATTGAGTACCGTCACGATCGTGATGTCGCCCGCGAACAACGCTGCC 54006 Query 152977 AATT-ATTCCGTGATATCAAGGGTTTGATGACTCTTAGTAACAAAGAATTAACCAACGAA 153035 || | || | | || || | | ||| | || |||| | | |||||| Sbjct 54005 GTTTGAATCAGGAAATTCGCGGTCTGGTTGAA-CAGAGCAACATGGCTCTGCTCAACGAG 53947 Query 153036 AACGCAAACAAAGATTCTCGCGTATTCCCGACTAAACGCGATCTTCTGGCTGGTATCGTT 153095 ||||| |||||||| | || |||| || | ||||| || ||||| ||||||||| Sbjct 53946 AACGCCAACAAAGACAGTAAAGTGATCCCTACCCAGCGCGACCTGCTGGCCGGTATCGTT 53887 Query 153096 TCTAAACA-TATGGCGCGTAACCATATTCTACCGAAACATATTGTTGCGGCGCATGATTC 153154 | || || |||| | | ||| |||| || ||| | | || || ||||| Sbjct 53886 GCCAAGCACTATGCCAAGCAAC-ATATCCTGCCGCGCGACGTGGTGATTGCCCATGAACG 53828 Query 153155 CGGTGATATTCATTATCACGATCTGGATTACAGCCCTTTCACCCC-ATACACTAACTGCT 153213 |||||| ||||| || ||||||||||| ||| ||| ||| ||| || | ||||| Sbjct 53827 CGGTGAAATTCACTACCACGATCTGGACTACTCCCCGTTCTTCCCGATGTTC-AACTGTA 53769 Query 153214 GTCTTGTTGACCTGAAAGGCATGTTAGAAAACGGGTTCCGTATGGGTAACGCTGATATCG 153273 ||| | ||||| |||||||||| || |||||| ||||||||||| || || | Sbjct 53768 TGCTTATCGACCTTGAAGGCATGTTGACCAAAGGGTTCAAGATGGGTAACGCAGAGATTG 53709 Query 153274 AACCGCCTAAATCAATCGGTGTTGCTACTGCTCTTATGGCTCAGATCACCGCACAGATTG 153333 | ||||| ||||| ||| || || || | | ||| || |||| ||| ||| | | Sbjct 53708 AGCCGCCAAAATCCATCTCAACCGCGACGGCAGTGACGGCCCAAATCATCGCGCAGGTGG 53649 Query 153334 CTTCTCACCAGTACGGCGGGACAACCTTTGCAAATGTCGATCAGGTGCTGGCCCCTTACG 153393 | ||| |||||||| || ||| || | ||||| | | ||||| || | || Sbjct 53648 CAAGCCACATCTACGGCGGCACCACCATTAACCGTATCGATGAAATTCTGGCACCGTTCG 53589 Query 153394 TTGAAATGACGTACAACAAACACTTTAAA---GATGCTGTTTGGTACGGGGTTCCTAAAT 153450 | | | || || ||| || | || || ||| || |||| | Sbjct 53588 TCACCGCTAGCCATAAAAAGCACCGGGAAACCGCTGATGAGTGGCAC---ATTCCCGATG 53532 Query 153451 CAAAACAGTATGCGATGGAAAAAACAGAAAAGGATGTATTCGATGCGTTCCAGTCATACG 153510 | | |||||| || || | || | ||| || |||||||| | Sbjct 53531 CGGACGCCTATGCGCTGTCTCGTACCTA----GAGTGCTACGACGCCTTCCAGTCGCTGG 53476 Query 153511 AATATGAAGTAAACACCTTACATACTGCAAATGGACAGACGCCTTTTGTCACGATCACTT 153570 ||||||||||||| || | || ||||| ||||| |||||||| || ||||| | || Sbjct 53475 AATATGAAGTAAATACGCTGCACACTGCCAATGGTCAGACGCCGTTCGTCACCTTTGGTT 53416 Query 153571 TCGGTATGGGTACTGGTTGGCGCGAA---CGCATGATCCAGAAAGCAATTCTGAAAAACC 153627 ||| | || || ||||| ||| || |||||||| || | || ||| |||| Sbjct 53415 TCGACCTCGGCACCAGTTGG---GAATCGCGTCTGATCCAGCAATCCATCCTGCGCAACC 53359 Query 153628 GTATTCGTGGACTGGGTAAAAAAGGCATTACTCCTGTATTCCCAAAACTGGTTATGTTTA 153687 ||||| || ||||| ||||| | | ||| | || ||||| |||||||| | || Sbjct 53358 GTATTGCCGGTCTGGGCAAAAACCGTAAAACTGCGGTGTTCCCCAAACTGGTGTTCGCTA 53299 Query 153688 TGGAAAAAGGGATTAACCTTAATCCGGAAGACAGAAACTATGATATTAAGAAATTGGCCC 153747 | | || | || | || | | || |||||||| || ||| || |||| | Sbjct 53298 TCCGCGACGGTGTCAATCACAAGGCTGCCGATCCGAACTATGACATCAAGCAACTGGCAC 53239 Query 153748 TGGAATGTTCTTCAAAGCGTATGTATCCGGATAT 153781 |||| || || ||||| ||||| |||||||| Sbjct 53238 TGGATTGCTCCAGCAAGCGGATGTACCCGGATAT 53205 >seq89 Length=3091062 Score = 86.0 bits (94), Expect = 7e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 51227 GGACAGCATTTAAACGTAAACGTGTTGCGCCGCGAAACTCTCCTGGATGCGGTTGAACAT 51286 || || ||||||||| ||||||| || ||| || || | | ||||| | || ||| Sbjct 1506518 GGCCATCATTTAAACATAAACGTCTTTAACCGAGACACATTGTTAGATGCAATGGATCAT 1506459 Query 51287 CCTGAAAAATACCCACAGTTAACGATCCGTGTTTCTGGTTATGCAGT 51333 |||||| |||||||||| |||| || ||||||||||| |||||||| Sbjct 1506458 CCTGAAGAATACCCACAACTAACTATACGTGTTTCTGGCTATGCAGT 1506412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 558057419872320