Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq157 136 4e-27 >seq157 Length=245904 Score = 136 bits (150), Expect = 4e-27 Identities = 759/1195 (64%), Gaps = 71/1195 (6%) Strand=Plus/Minus Query 154800 CAACGAGAACGCAAACAAAGACGCACGGGTATTCCCTACACAGCGTGATTTGCTGGCGGG 154859 |||||||||||| ||||||||| || ||||||| ||||| || ||||||| || Sbjct 53953 CAACGAGAACGCCAACAAAGACAGTAAAGTGATCCCTACCCAGCGCGACCTGCTGGCCGG 53894 Query 154860 TATTGTAGCGAAGCATTTCGCCCGTAATCATATCCTTCCGAAACATATCGTAGAAGCGCA 154919 ||| || || ||||| | ||| | |||||||| ||| | | || || || Sbjct 53893 TATCGTTGCCAAGCACTATGCCAAGCAACATATCCTGCCGCGCGACGTGGTGATTGCCCA 53834 Query 154920 TGACTCCGGCGACATCCATTATCACGATCTGGACTATAGCCCGTTCACCCCTTACACTAA 154979 ||| ||| || || || || |||||||||||||| ||||||| ||| || Sbjct 53833 TGAACGCGGTGAAATTCACTACCACGATCTGGACTACTCCCCGTTCTTCCCGATGTTCAA 53774 Query 154980 CTGCTGTCTGGTTGACCTGAAAGGTATGCTTGA-GAACGGTTTCAAGATGGGTAACGCGG 155038 ||| || | ||||| |||| ||| |||| || || ||||||||||||||||| | Sbjct 53773 CTGTATGCTTATCGACCTTGAAGGCATG-TTGACCAAAGGGTTCAAGATGGGTAACGCAG 53715 Query 155039 ACATTGAACCGCCTAAATCGATCGGTGTTGCTACCGCTCTCATGGCGCAGATCACCGCAC 155098 | ||||| ||||| ||||| ||| || || || | | ||| || |||| ||| | Sbjct 53714 AGATTGAGCCGCCAAAATCCATCTCAACCGCGACGGCAGTGACGGCCCAAATCATCGCGC 53655 Query 155099 AGATTGCCTCTCACCAGTACGGCGGGACAACCTTT--GCGAACGTTGATAAAGTGCTGGC 155156 || | || ||| |||||||| || ||| || || | | ||| || | ||||| Sbjct 53654 AGGTGGCAAGCCACATCTACGGCGGCACCACCATTAACCGTA--TCGATGAAATTCTGGC 53597 Query 155157 TCCATACGTAGAAATGACATTCTTCAAACATCTGCGCGATGCTGAACATTA-TGGTATCG 155215 || | ||| | | | | | ||| | | || || | | || | ||| Sbjct 53596 ACCGTTCGT--CACCGCTAGCCAT-AAAAAGCACCGGGAAACCGCTGATGAGTGG----- 53545 Query 155216 AACACTATAACGATTATGTGTATGCAATCGAGAAGAC-CG-AAAAAGATGTATTCGATGC 155273 ||| | || ||| | | || | | | | || | ||| | ||| || Sbjct 53544 --CACATTCCCG---ATGCGGACGCCTATGCGCTGTCTCGTACCTAGAGTGCTACGACGC 53490 Query 155274 GTTCCAGTCCTATGAGTATGAAGTGAATACCCTGCATACTGCCAACGGGCAAACCCCGTT 155333 |||||||| || |||||||| ||||| ||||| |||||||| || || || ||||| Sbjct 53489 CTTCCAGTCGCTGGAATATGAAGTAAATACGCTGCACACTGCCAATGGTCAGACGCCGTT 53430 Query 155334 TGTTACCATCACTTTCGGTACTGGTACAAGCGACTATGAA---CGCATGATCCAGAAAGC 155390 || ||| | ||||| || || || | ||| || |||||||| || | Sbjct 53429 CGTCACCTTTGGTTTCGACCTCGGCACCAG---TTGGGAATCGCGTCTGATCCAGCAATC 53373 Query 155391 GATTCTGAAAAATCGTATTCGCGGCCTGGGTAAAGAGGGTATCACTCCGGTATTCCCTAA 155450 || ||| || |||||| ||| ||||| ||| | ||| ||| |||| ||||| || Sbjct 53372 CATCCTGCGCAACCGTATTGCCGGTCTGGGCAAAAACCGTAAAACTGCGGTGTTCCCCAA 53313 Query 155451 ACTGGTTATGTTC---ATGGAAAAAGGAATCAACCTTGATCCAGAGGATCAGAACTATGA 155507 ||||| ||||| || | || |||| | | | | |||| ||||||||| Sbjct 53312 ACTGG---TGTTCGCTATCCGCGACGGTGTCAATCACAAGGCTGCCGATCCGAACTATGA 53256 Query 155508 CATCAAACAACTTGCCCTTGAATGTGCTTCGAAACGCATGTACCCAGATATC----ATTA 155563 |||||| ||||| || || || || | || || |||||||| |||||| |||| Sbjct 53255 CATCAAGCAACTGGCACTGGATTGCTCCAGCAAGCGGATGTACCCGGATATCCTCAATTA 53196 Query 155564 -GTTCAGCTAATAACCGCGCTATTACTGGTTCTAGCGTTCCTGTATCTCCTATGGGTTGT 155622 | |||| | | | | |||| || | |||| | | || ||||| || Sbjct 53195 CGATCAGGTTGTTAAGG-----TTACCGGCT----CGTT--TAAGACGCCCATGGGCTGC 53147 Query 155623 CGCAGTTTCCTTAGCGTGTGGCATGATGATAACGGTAATGAAATTCTGGATGGACGTAAT 155682 | ||| |||||| |||||| |||| || | || || | || | ||||| || || Sbjct 53146 CACAGCTTCCTTGGCGTGT---ATGAGGAAGAGGGCAAGCAGATCCACGATGGTCGCAAC 53090 Query 155683 AATCTGGGTGTGGTGACAATCAACCTCCCACGTATTGCGATCGAAGCCGAAGCACAGGAA 155742 || || || || | | ||||||| || || || ||| | ||||| ||| |||| | Sbjct 53089 AACCTCGGGGTAATCAGCCTCAACCTGCCGCGCATCGCGCTGGAAGCGGAA-CACA--AC 53033 Query 155743 GAAGAAGACGCACACGATGCATTT-TGGCGTATCCTTGATGAACGTCTGGATCTTTGTTA 155801 ||||| || ||| ||| | || ||| | |||||| | || | Sbjct 53032 GAAGA-------------GCGTTTCTGGAACCTGCTGGATAATCGTCTGCAACTGGCGAA 52986 Query 155802 CGATGCTCTGATGACTCGTATCGAAAGCCTACGCGGTGTTAAAGCCAGTGTAGCCCCGAT 155861 | || ||||||| || |||| | | || |||||| |||| || ||||| Sbjct 52985 AAAAGCGTTGATGACGCGCATCGCGCGTTTGGAAAACGTCAAAGCCCGTGTCGCTCCGAT 52926 Query 155862 CCTGTACACAGAAGGTGCGTTTGGTGTACGCCTGAAACCGGATGATGAAATTCTGGAACT 155921 |||||| | |||||||| | ||||||||||||||| | || || | | || | Sbjct 52925 CCTGTATATGGAAGGTGCCTGCGGTGTACGCCTGAAAGCAGACGACAACGTCGCTGAGAT 52866 Query 155922 GTTCAAAAATGGGCGTAGTTCTATCAGTCTGG-GCTATATCGGGCTGCATGAAAC 155975 |||||||| || || || ||| ||| ||||||| ||| | ||||| || Sbjct 52865 CTTCAAAAACGGTCGGGCATCGATCTCATTGGAGCTATATTGGGGTTCATGAGAC 52811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565583687972160