Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_014595.1 Length=170605 Score E Sequences producing significant alignments: (Bits) Value seq89 104 3e-17 >seq89 Length=3091062 Score = 104 bits (114), Expect = 3e-17 Identities = 194/281 (69%), Gaps = 3/281 (1%) Strand=Plus/Minus Query 39981 ATATCAGGATACATTCTTTTGCTTGCACACTCTAAAGCAAGCTGCTTAATATCATAGTTT 40040 |||||||||||||||||||| | | |||||||| || | || || |||||||| || Sbjct 556794 ATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATTC 556735 Query 40041 GGGTCGTCTTTATAAAGATTAACACCTTCTTCAACGAACATAACAAGTTTAGGGAAAATA 40100 || || | | || ||| || |||| || || | | |||||||| ||||| || Sbjct 556734 GGATCTTTCGAACTAAAATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGATG 556675 Query 40101 GGAGTTATCCCATCACGACCAAGACCTTTAATACGATTTTTCAGAATTGCTTTCTGAATC 40160 | ||| || | ||| ||| | |||||| || | | | || |||||||||| || || Sbjct 556674 GCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTGGATT 556615 Query 40161 ATTC-GTTCGGTCCAGTCAGTTCCGGTACCAAATGTAATTGTCACAAAAGGAGTCTGACC 40219 | | | | | | || ||||| |||||| | ||| |||||||| || ||||| Sbjct 556614 TTACGGCTATATGTA-TCTGTTCCTAATCCAAATCCTAATGTTACAAAAGGTGTTTGACC 556556 Query 40220 ATTTGAGCTAAAGAGAGTATTTACTTCATATTCATAAGCTT 40260 |||||| || | | || || | ||||||||| ||| ||| Sbjct 556555 ATTTGATGTATACAATGTGTTAATTTCATATTC-TAAACTT 556516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545798434714800