Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq157 320 2e-82 seq89 104 3e-17 >seq157 Length=245904 Score = 320 bits (354), Expect = 2e-82 Identities = 1176/1807 (65%), Gaps = 76/1807 (4%) Strand=Plus/Plus Query 123222 TGTTTGACACGACGCTGGACTTCGTCCTGTTTGCCGACGTTAAATGCGCGAG-ATCCAGG 123280 || |||| || || | ||| || |||||||| ||| ||||||| | || | |||| || Sbjct 52184 TGCTTGATCCGGCGTTTGACCTCCTCCTGTTTCCCGGCGTTAAACGGACGTGCATCC-GG 52242 Query 123281 GTTACCCAAATACCCACAGACGCGACGAATAAC-GTTCATCTTACGGTCATCGTGATTGC 123339 | | |||| ||| ||||| || ||||| | || | | | | ||| |||||||||| Sbjct 52243 GCTGCCCAGATAGCCACATACCCGACGCGTTACAGATACGCGTGCGGAG-TCGTGATTGC 52301 Query 123340 CACACTTCGGACATTCGTATCCTTTAGAAGTAGCGGT-AAACTCACCGTTAAATCCACAT 123398 |||| ||||| || | | ||||| || || | ||| |||||| | || ||||| Sbjct 52302 CACATTTCGGGCAGGTGAAGCCTTTGCTGGT-GCACTCAAATTCACCGGTGAAGCCACAC 52360 Query 123399 TCAAAACAAACATCAACTGGAGTGTTTGTTCCATAGTACGGAGTGTTCCGATAAGCATAA 123458 ||| |||| |||| | || || || || || || || || | ||| ||| Sbjct 52361 TCATAACACTCATCGATCGGCGTATTGGTGCCGTAATAGGGCACACGGCTATAGCTGTAA 52420 Query 123459 TCCCAAACTGCTTCGAGTGCTTCCAGATTGTGTTTCATATTCGGATATTCACCGTATGAA 123518 ||||| || |||| || |||| || || |||| || |||||||| || ||||| || Sbjct 52421 TCCCAGACGTCTTCCAGCGCTTTGAGGTTATGTTGCAGGTTCGGATACTCGCCGTAGCAA 52480 Query 123519 ATGAAACCACCGGTACTAAGCGGAATGAATTGCTTTTCAAAATCGATCTTGTCATACGGA 123578 ||||| || ||| | ||||| | | || |||||| ||||| || | || ||| Sbjct 52481 ATGAAGCCTCCGTTTGCCAGCGGTGGGTAGGGCAGTTCAAAGTCGATTTTCTGGTAAGGA 52540 Query 123579 TTTGTGTTCATATCCACAGACAGATGGAAGCTGTTTGTGTAATAGTCTTTATCAAACAC- 123637 || ||| | ||||| ||| || |||||||| ||||| || ||||||| ||| Sbjct 52541 TTCACCTTCTTCTCCACGTCCAGGTGAAAGCTGTTGGTGTAGTAACCTTTATCGGTCACG 52600 Query 123638 -CTTGTGCTCATACAGA-----GCGTGATCGATCTTAGCGAAACGATAACACAGACTTTC 123691 || || | || | || ||| ||||| |||||| | |||||| |||| Sbjct 52601 CCTGGTAC-CACGCCGAATTCAGCGGTGTCGATACGGCAGAAACGGTCACACAGGTTTTC 52659 Query 123692 AGATGGAGTGCCATACAGACT-AAACGCCAGTCCAGTTTCTGCTTTCCACGCATTAGCCA 123750 | || || | || || || |||| || || |||||| |||||||| || | | Sbjct 52660 ACTCGGCGTACTGTAAAGGCTGAAACCGTAG-CCGGTTTCTTCTTTCCACTGATCGGTCG 52718 Query 123751 TTTCTTTCATGCGAG--ACAATA-CGTCCAGCAAGA-ATGCTTGTTTCTCGGCGTTTTCC 123806 |||||| ||| | || || || || | | || ||| ||| || || Sbjct 52719 CGGCTTTCAGGCGTGCGACGATGGCGACCGCCTTTTCACGCA-GTTGCTCA---TTGTCG 52774 Query 123807 ATAACGTGCGATTCATCGTTG---AAC------TTGATGATCTCAGATACTTCATGCAAT 123857 | ||||| | || | |||| ||| || ||| ||||| || | Sbjct 52775 AACACGTGTG--TC-TGGTTGCCAAACAGCGCGTTAATGGTCTCA---------TGAACC 52822 Query 123858 CCAATATAGC--CAATGCTAACAGATGCGCGACCATTTTCAAATGCTTTCAT-GATGTCA 123914 |||||||||| ||||| | | ||||| ||||| |||| || | | ||| || || Sbjct 52823 CCAATATAGCTCCAATGAGATC-GATGCCCGACCGTTTTTGAA-GATCTCAGCGACGTTG 52880 Query 123915 TCATTTGGTTTCAGACGAACACCACAAGCACCTTCAACATAAAGAATCGGAGCAACGCTT 123974 || | || |||||| || ||||| || |||||||| | ||| || |||||||| || | Sbjct 52881 TCGTCTGCTTTCAGGCGTACACCGCAGGCACCTTCCATATACAGGATCGGAGCGACACGG 52940 Query 123975 GCCTTGACACCACGCAGACGATCAACGCGAGTCAACAAAGCTTTCTTAACGATTTCCATA 124034 || ||||| || ||| | | ||| |||| ||| ||||| || | | || || | Sbjct 52941 GCTTTGACGTTTTCCAAACGCGCGATGCGCGTCATCAACGCTTTTTTCGCCAGTTGCAGA 53000 Query 124035 CGCTCTTCCAGAATTTCAAAGAAGCGCATTTGATTGCCGTTTGCGTCGAGTGCGATACGC 124094 || | ||||| | | |||| ||| || ||| | || || || ||||| ||| Sbjct 53001 CGATTATCCAGCAGGTTCCAGAAACGCTCTTCGTTGTGTTCCGCTTCCAGCGCGATGCGC 53060 Query 124095 GGCAAGTTCAGAGTAACAACACCGAGATTGTTTCTGCCTTCATGAACTTCATTACCGGTT 124154 |||| ||| || | | || ||||| ||||| | || || || | | || || | Sbjct 53061 GGCAGGTTGAGGCTGATTACCCCGAGGTTGTTGCGACCATCGTGGATCTGCTTGCCCTCT 53120 Query 124155 TCGTCTTCCCAGCGATGCAAGAAACTACGGCATCCCATAGGGAACTTAAAGCTACCAGTC 124214 || || | | || | | ||| || |||| ||||| || |||||| || || Sbjct 53121 TCCTCATACACGCCAAGGAAG---CTGTGGCAGCCCATGGGCGTCTTAAACGAGCCGGTA 53177 Query 124215 ACTTCTACCACTTTATCATAACTCAAGATGTCTGGATACATACGCTTGGCAGCGCACTCC 124274 || | || || | ||| ||| | | ||| || || ||||| |||||| | ||| ||| Sbjct 53178 ACCTTAACAACCTGATCGTAATTGAGGATATCCGGGTACATCCGCTTGCTGGAGCAATCC 53237 Query 124275 AGTGCCATCTGTTTGATACGATACAGAGGATCAGTTGGTTTCAAGTTGTGTCCGTCTTTC 124334 ||||||| || ||||| ||| ||||| | | || ||| ||||| Sbjct 53238 AGTGCCAGTTGCTTGATGTCATAGTTCGGATCGGCAGCCTTGTGATTGACACCGTCGCGG 53297 Query 124335 AGCGCGAAAACAAGTTTCGGGAAAACGGGAGTAATACCTTCTTTGCCAAGACCTTTCATC 124394 | ||||| || ||||| ||||| || | ||| ||| | |||||| ||||| || Sbjct 53298 ATAGCGAACACCAGTTTGGGGAACACCGCAGTTTTACGGTTTTTGCCCAGACCGGCAATA 53357 Query 124395 CGAACTTTCAGAATTGCTTCCTGAATGAGTTCGGATTCCCAGCTAGTGCCTAGTCCAAAC 124454 || ||| || | || ||| || || |||||||| || ||||| || | || Sbjct 53358 CGGTTGCGCAGGATGGATTGCTGGATCAGACGCGATTCCCAACTGGTGCCGAGGTCGAAA 53417 Query 124455 CCGAAAGTGCAGAATGGAGTTTGACCATTTGCCGAGTGCAGAGTGTTTACCTCATACTCT 124514 || || ||| ||| || || |||||||| || | |||||| || ||||| ||||| || Sbjct 53418 CCAAAGGTGACGAACGGCGTCTGACCATTGGCAGTGTGCAGCGTATTTACTTCATATTCC 53477 Query 124515 AGGCTTTGCATTGCATCATA-CACGGCTTTG--CGAGTCTTTTCAATAGCGTATTGCCTT 124571 || || | || || || ||| || | |||| | |||| || | | | Sbjct 53478 AGCGACTGGAAGGCGTCGTAGCACT-CTAGGTACGAGAC--------AGCGCATAGGCGT 53528 Query 124572 TG--ATCTGGAATTTTCCAATAAC--GCGCTTCATCCAAATGCTTTTCATGTGTCATCTT 124627 ||| ||||| | ||| | | ||| || ||| ||||||| ||| | | Sbjct 53529 CCGCATCGGGAATGTGCCACTCATCAGCGGTT--TCCCGGTGCTTTTTATGGCTAGCGGT 53586 Query 124628 AACATAAGGTGCCAATGCTTCGTCAATGCGATTAATTGTGTTGCCACCATAAATGTGACT 124687 || | ||||||| ||| || || || ||||| ||| |||| || || ||||| || Sbjct 53587 GACGAACGGTGCCAGAATTTCATCGATACGGTTAATGGTGGTGCCGCCGTAGATGTGGCT 53646 Query 124688 TGCAACCTGTGCAATGATTTGAGCAGTAACAGCCGCAGCGGTAGCGATGCTCTTAGGAGT 124747 ||| ||||| || |||||||| || || || |||| ||||| | |||| || || | Sbjct 53647 TGCCACCTGCGCGATGATTTGGGCCGTCACTGCCGTCGCGGTTGAGATGGATTTTGGCGG 53706 Query 124748 TTCGATCTGTGCATTACCCATGCGGAACCCAC-GCTCTAACATGCCGTTGAGATCAATCA 124806 || |||| ||| |||||||| |||||| | || |||||||| | || || || | Sbjct 53707 CTCAATCTCTGCGTTACCCATCTTGAACCCTTTGGTC-AACATGCCTTCAAGGTCGATAA 53765 Query 124807 ACATGCAGTTAAACATTGGGAAGAACGGAGAGTAATCAAGATCATGGAAGTGAATAAAAC 124866 ||| ||||| ||||| ||||||||||| ||||| || ||||| ||| ||||||| || Sbjct 53766 GCATACAGTTGAACATCGGGAAGAACGGGGAGTAGTCCAGATCGTGGTAGTGAATTTCAC 53825 Query 124867 CAGCTTCGTGTGCTTGCAGAACTTCGGTCGGCAG---ATAGTGCTTTGCAAAGTGCTTGC 124923 | ||| || || || || ||| |||||| || ||||| ||| |||||||| Sbjct 53826 CGCGTTCATGGGCAATCACCACGTCGCGCGGCAGGATATGTTGCTTGGCATAGTGCTTGG 53885 Query 124924 TTACTATGCCCGCGACTAAATCGCGTTGTGTCGGAATAACTTTTGCATCTTTGTTTGCAT 124983 || || || || | | ||||| || || || || ||||| |||||||| || | Sbjct 53886 CAACGATACCGGCCAGCAGGTCGCGCTGGGTAGGGATCACTTTACTGTCTTTGTTGGCGT 53945 Query 124984 TCTCATT 124990 |||| || Sbjct 53946 TCTCGTT 53952 >seq89 Length=3091062 Score = 104 bits (114), Expect = 3e-17 Identities = 256/382 (67%), Gaps = 6/382 (2%) Strand=Plus/Minus Query 124153 TTTCGT-CTTCCCAGCGATGCAAGAAACTACGGCATCCCATAGGGAACTTAAAGCTACCA 124211 |||||| ||||| ||| |||| || ||| || ||||| || ||||| ||| Sbjct 556883 TTTCGTTCTTCCAAGCTG-GCAAAAACGAACGACAACCCATCGGAGCTTTAAAATCACCT 556825 Query 124212 GTCACTTCTACCACTTTATCATAACTCAAGATGTCTGGATACATACGCTTGGCAGCGCAC 124271 | ||||||| |||||||||| |||| || || |||||||| | || | || |||| Sbjct 556824 AATATTTCTACCGTTTTATCATAATTCAAAATATCAGGATACATTCTTTTAGTAGAGCAC 556765 Query 124272 TCCAGTGCCATCTGTTTGATACGATACAGAGGATCAGTTGGTTTCAAGTTGTGTCCGTCT 124331 || | ||| | ||||| ||| ||| ||||| | | | || || || | | Sbjct 556764 TCTAATGCTAATTGTTTTATATCATAATTCGGATCTTTCGAACTAAAATTCACGCCTTTT 556705 Query 124332 TTCAGCGCGAAAACAAGTTTCGGGAAAACGGGAGTAATACCTTCTTTGCCAAGACCTTTC 124391 || | | || |||||||| ||||| | || |||||||| ||||| || | |||||| Sbjct 556704 TTAATTGAAAACACAAGTTTTGGGAAGATGGCAGTAATACGATCTTTACCCAAACCTTTG 556645 Query 124392 ATCCGAACTTTCAGAATTGCTTCCTGAATGAGTTCGG--ATTCCCAGCTAGTGCCTAGTC 124449 || | | || |||||||||| || || | ||| || | || || |||| || Sbjct 556644 ATTCTAGTGTTAAGAATTGCTTGTTGGATTT-TACGGCTATATGTATCT-GTTCCTAATC 556587 Query 124450 CAAACCCGAAAGTGCAGAATGGAGTTTGACCATTTGCCGAGTGCAGAGTGTTTACCTCAT 124509 |||| || || || || || ||||||||||||| | | || ||||| | |||| Sbjct 556586 CAAATCCTAATGTTACAAAAGGTGTTTGACCATTTGATGTATACAATGTGTTAATTTCAT 556527 Query 124510 ACTCTAGGCTTTGCATTGCATC 124531 | |||| |||| || ||||| Sbjct 556526 ATTCTAAACTTTCTATAGCATC 556505 Score = 87.8 bits (96), Expect = 3e-12 Identities = 70/83 (84%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 189966 TGCGGATGGTCGGACTCGAACCGACACGCC-TATGGCGCTAGAACCTAAATCTAGTGCGT 190024 ||||| || ||| ||||||| |||||| || ||||||||| ||||| |||||||||| Sbjct 1468594 TGCGGGTGAAGGGAGTCGAACCCCCACGCCGTAAGGCGCTAGATCCTAAGTCTAGTGCGT 1468535 Query 190025 CTGCCAATTTCGCCACATCCGCG 190047 ||||||||| ||||||| ||||| Sbjct 1468534 CTGCCAATTCCGCCACACCCGCG 1468512 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 191862 TGGTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACCA 191921 ||||| ||| | ||| ||||||||| ||||||| ||||||||||| |||||||||||| Sbjct 1468499 TGGTGAGCCATAGTGGGCTCGAACCACTGACCCTCTGATTAAAAGTCAGATGCTCTACCA 1468440 Query 191922 ACTAAGCTAACGGC 191935 ||| |||||| ||| Sbjct 1468439 ACTGAGCTAATGGC 1468426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720716969213760