Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq89 87.8 2e-12 >seq89 Length=3091062 Score = 87.8 bits (96), Expect = 2e-12 Identities = 185/275 (67%), Gaps = 6/275 (2%) Strand=Plus/Minus Query 40175 ATGTCAGGATACATTCGTTTACTTGCACATTCCAATGCAAGTTGTTTGATGTCATAATTC 40234 || ||||||||||||| |||| | | || || ||||| | |||||| || ||||||||| Sbjct 556794 ATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATTC 556735 Query 40235 ACATCAGTTGGATGAAGGTTAATTCCTTCTTCAACAAACATAACGAGCTTAGGAAAAATT 40294 ||| | | | || || | |||| || || | | || || || || || || Sbjct 556734 GGATCTTTCGAACTAAAATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGATG 556675 Query 40295 GGAGTGATTCCGTCTCGTCCAAGGCCTTTGATTCTATTTTTGAGAATAGCTTTTTGAATC 40354 | ||| || | ||| || | |||||||||||| | || ||||| |||| ||| || Sbjct 556674 GCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTGGATT 556615 Query 40355 ATACGTTCATA---ATCGCTTGTGCCAGTACCAAAGGTAATTGTCACGAATGGAGTTTGA 40411 |||| ||| ||| ||| || ||||| | ||| || || || |||||| Sbjct 556614 TTACGGCTATATGTATC---TGTTCCTAATCCAAATCCTAATGTTACAAAAGGTGTTTGA 556558 Query 40412 CCATTTGAGCTGAACAGAGTATTGACTTCATATTC 40446 |||||||| | ||| || || | ||||||||| Sbjct 556557 CCATTTGATGTATACAATGTGTTAATTTCATATTC 556523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529590718760000