Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq570 116 5e-21 >seq570 Length=38645 Score = 116 bits (128), Expect = 5e-21 Identities = 277/413 (67%), Gaps = 18/413 (4%) Strand=Plus/Minus Query 15846 TCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCGACCTGGGCGA 15905 || |||||| |||| ||| || ||||||| || | | |||||| ||||| || || Sbjct 30170 TCACGTCCCTTAACATCTGGACGACCTACTTGAATTTGTCTATCAAAACGACCCGGACGT 30111 Query 15906 AGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCT--G 15963 | | || ||| | || ||| || || || || || || | || || ||| | Sbjct 30110 AATAATGCTGGATCTAAAATGTCAGGACGGTTAGTAGCAGCTATCATAATGATGCCTTCG 30051 Query 15964 TTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCAT 16023 ||| | | |||| |||||||| || || | || || | |||||||| ||||||| Sbjct 30050 TTT--TCACCAAATCCATCCATTTCAACTAATAATTGATTCAATGTTTGTTCACGTTCAT 29993 Query 16024 CATTCGCTG-GCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATG 16082 | | | || || |||||||| ||||| ||| || |||||||| || |||||| Sbjct 29992 CGTGGCCACCGCCGAC-ACCAGCACCACGTTGACGTCCAACTGCATCAATTTCGTCAATG 29934 Query 16083 AAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCG 16142 || | ||| || || ||||| ||| |||||| | ||| |||||||| | || Sbjct 29933 AAAATGATACAAGGCGCATTTTTCTTAGCATTTTCAAATAAATCACGTACACGGCTTGCA 29874 Query 16143 CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC-----ATTG-GATGAAGGGG 16196 || ||||||||||||||||| ||||||| | |||| |||| || ||| || Sbjct 29873 CCGACACCAACAAACATCTCAACAAAGT------CAGAACCACTGATTGAGAAGAATGGT 29820 Query 16197 ACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 | || |||||| |||| || || || || | || ||||| ||||| || Sbjct 29819 GTACCAGCTTCACCAGCAACCGCACGTGCAAGTAATGTTTTACCTGTACCAGG 29767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620731521489440