Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq570 113 5e-20 seq105 91.5 2e-13 >seq570 Length=38645 Score = 113 bits (124), Expect = 5e-20 Identities = 276/413 (67%), Gaps = 18/413 (4%) Strand=Plus/Minus Query 9153 TCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCGACCTGGACGA 9212 || |||||| |||| ||| || ||||||| || | | |||||| ||||| ||||| Sbjct 30170 TCACGTCCCTTAACATCTGGACGACCTACTTGAATTTGTCTATCAAAACGACCCGGACGT 30111 Query 9213 AGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCT--G 9270 | | || ||| | || ||| || || || || || || | || || ||| | Sbjct 30110 AATAATGCTGGATCTAAAATGTCAGGACGGTTAGTAGCAGCTATCATAATGATGCCTTCG 30051 Query 9271 TTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCAT 9330 ||| | | |||| |||||||| || || | ||| || | |||||||| ||||||| Sbjct 30050 TTT--TCACCAAATCCATCCATTTCAACTAATAATTGATTCAATGTTTGTTCACGTTCAT 29993 Query 9331 CATTCGCTG-GCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATG 9389 | | | || || |||||||| ||||| ||| || |||||||| || |||||| Sbjct 29992 CGTGGCCACCGCCGAC-ACCAGCACCACGTTGACGTCCAACTGCATCAATTTCGTCAATG 29934 Query 9390 AAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCG 9449 || | ||||| || ||||| || ||||||| | ||| || || | | || Sbjct 29933 AAAATGATACAAGGCGCATTTTTCTTAGCATTTTCAAATAAATCACGTACACGGCTTGCA 29874 Query 9450 CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC-----ATTG-GATGAAGGGG 9503 || ||||||||||||||||| ||||||| | |||| |||| || ||| || Sbjct 29873 CCGACACCAACAAACATCTCAACAAAGT------CAGAACCACTGATTGAGAAGAATGGT 29820 Query 9504 ACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 | || |||||| |||| || || || || | || ||||| ||||| || Sbjct 29819 GTACCAGCTTCACCAGCAACCGCACGTGCAAGTAATGTTTTACCTGTACCAGG 29767 >seq105 Length=1502237 Score = 91.5 bits (100), Expect = 2e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 106504 TGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTG 106563 ||| || |||| ||||||||||| | ||| || ||||| || |||||||||| ||| Sbjct 285627 TGTATATTCTACTATTTCTGTACAAAGATTGCTACATTTAATGGTGCCCAAATTCTGTTG 285568 Query 106564 GTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTG 106623 ||| ||| ||||||||||||| ||||| |||||||| || || || ||| ||| Sbjct 285567 GTTGGATTTTCTGTTGCACGCATCTTTGTACAGCATGTAAGGAACACCGGTTTCCACCTG 285508 Query 106624 TGACTTGAGAATTGCCTTCCACA 106646 |||| | || || ||||||| Sbjct 285507 AGACTCAATTATAGCATTCCACA 285485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589970460586480