Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_015252.1 Length=36953 Score E Sequences producing significant alignments: (Bits) Value seq89 190 5e-44 >seq89 Length=3091062 Score = 190 bits (210), Expect = 5e-44 Identities = 236/323 (73%), Gaps = 0/323 (0%) Strand=Plus/Minus Query 32036 TAAATGATGAATCGAGTTGTTTTAGTGGGCCGTTTAACAAAGGACCCCGAATTGAAATAT 32095 |||||||| ||| ||||||||||||| || |||||||| || || || |||| | | Sbjct 140634 TAAATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACGAAAGATCCAGAATATAGAACA 140575 Query 32096 ACACCTGCAGGAGCAGCAGTTGCCACATTTACACTAGCTGTAAATCGTACGTTTACGAAT 32155 ||||| |||| | ||||| || ||||| ||||| ||||| ||||||||||| ||| Sbjct 140574 ACACCCTCAGGCGTGAGTGTTGCGACTTTTACTCTAGCAGTAAACCGTACGTTTACAAAT 140515 Query 32156 CAGCAAGGTGAGCGTGAAGCTGATTACATTAACTGTGTCGTTTGGCGTAAGGCTGCCGAA 32215 |||||| || || ||||| |||| |||||| |||||||||| | || || || Sbjct 140514 GCGCAAGGGGAACGCGAAGCAGATTTCATTAATTGTGTCGTTTTTAGAAAACAAGCAGAT 140455 Query 32216 AGCGTAGCTAACTACTTGAAAAAAGGAAGTTTAGCAGGTGTTGATGGTCGATTACAAACA 32275 | ||| |||||||||| ||||| |||||||| || ||||| ||||| | ||| || Sbjct 140454 AATGTAAATAACTACTTGTTCAAAGGTAGTTTAGCGGGCGTTGACGGTCGCATTCAATCA 140395 Query 32276 CGTAACTATGAAGGCAATGACGGTAAGCGTGTATATGTGACAGAGGTCATTGCGGAAAGT 32335 |||| ||||||| | | || || ||||| | ||| || || || || || || Sbjct 140394 CGTAGCTATGAAAACCAAGAAGGACGTCGTGTTTTTGTAACTGAAGTAGTTTGTGATAGC 140335 Query 32336 GTACAGTTCCTAGAGCCTAAAAA 32358 || || ||||| || |||||||| Sbjct 140334 GTTCAATTCCTTGAACCTAAAAA 140312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118126033316460