Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_015274.1 Length=56506 Score E Sequences producing significant alignments: (Bits) Value seq89 201 4e-47 >seq89 Length=3091062 Score = 201 bits (222), Expect = 4e-47 Identities = 260/359 (72%), Gaps = 0/359 (0%) Strand=Plus/Plus Query 174 TTACTCTTTTAGGAAACCAAGACACCAAATACGATTATGACTATAATCCAGACGTCCTTG 233 ||||| | | || || ||| | | ||||| || | |||||| | |||| ||| | | Sbjct 2806037 TTACTTTACTCGGCAATCAAAATAATAAATATGAATTCGACTATGACCCAGCAGTCTTAG 2806096 Query 234 AAACTTTCCCTAACAAACATCCTGAAAATAATTACCTAGTAACATTTGACGGATATGAAT 293 || | || |||||||||||| | | | ||| | |||| |||| | | |||| Sbjct 2806097 AATCATTTGATAACAAACATCCCGGGCGTGACTACTTTGTAAAATTTAATTGTCCAGAAT 2806156 Query 294 TCACTTCCCTTTGCCCTAAAACAGGACAGCCTGACTTCGCGAATGTTTTCATTAGTTACA 353 | || || ||||| || | || || || ||||| || |||| ||| ||| ||| | Sbjct 2806157 TTACATCACTTTGTCCAATTACGGGTCAACCTGATTTTGCGACAATTTATATTTCTTATA 2806216 Query 354 TTCCAAACGAAAAGATGGTTGAATCTAAATCATTGAAATTGTACTTATTCAGTTTCCGTA 413 | ||||| ||| |||||||| || |||||||| ||| | |||||||| ||||| | | Sbjct 2806217 TACCAAATATAAAAATGGTTGAGTCAAAATCATTAAAACTTTACTTATTTAGTTTTAGAA 2806276 Query 414 ACCACGGTGACTTCCACGAAGATTGCATGAACATTATTTTGAATGACTTGTATGAATTGA 473 | |||||||||||||| |||||||| ||||| || ||| |||||||||| |||||| | Sbjct 2806277 ATCACGGTGACTTCCATGAAGATTGTATGAATATCATTATGAATGACTTAATTGAATTAA 2806336 Query 474 TGGAACCTAAGTACATTGAAGTCATGGGCCTATTCACTCCTCGTGGTGGAATTTCAATT 532 |||| ||| | || || ||||| |||| ||| || ||||||||||| ||||||||| Sbjct 2806337 TGGACCCTCACTATATCGAAGTTTGGGGCAAATTTACGCCTCGTGGTGGTATTTCAATT 2806395 Score = 95.1 bits (104), Expect = 4e-15 Identities = 108/144 (75%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 1923 TGAG-AAAATGCCTATCATGGAAATTTTCGGTCCTACAATTCAAGGTGAAGGAATGGTTA 1981 |||| ||||| ||| | | |||||||||||||| ||||||||||||||||| || | Sbjct 2830124 TGAGTAAAATACCTGTATTAGAAATTTTCGGTCCAACAATTCAAGGTGAAGGCCGTGTCA 2830183 Query 1982 TAGGTCAAAAGACTATTTTCATTCGAACTGGTGGATGCGACTATCATTGCAACTGGTGTG 2041 |||| | ||||| || || | ||||||| || || || || | ||||| ||||||| Sbjct 2830184 TAGGCCGCAAGACCATGTTTGTACGAACTGCCGGTTGTGATTACCGTTGCAGTTGGTGTG 2830243 Query 2042 ACTCAGCCTTTACCTGGAACGGTA 2065 | || ||||| ||| |||||| Sbjct 2830244 ATTCTAGTTTTACTTGGGACGGTA 2830267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180694591610832