Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq89 82.4 9e-11 >seq89 Length=3091062 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 104816 TTATTATTGAAAAACCTTTCGGCACTGATTTAAAATCAGCTGAGAATTTACA-GAGGAGT 104874 || ||||||||||||| || || || |||||| ||||||||| || ||| | ||| | | Sbjct 1942048 TTGTTATTGAAAAACCATTTGGTACGGATTTAGCATCAGCTGAAAAATTAAATGAGCAAT 1941989 Query 104875 ATCTCTACACATATTAGAGAGAAACAAATCTATCGTATTGATCATTATCTCGGTAAAGAT 104934 | ||| ||| ||| || | || |||||||| |||||||| | ||||||||| Sbjct 1941988 TACGTCGTTCAT-TTAAAGAAGAAGAGATTTATCGTATCGATCATTACTTAGGTAAAGAT 1941930 Query 104935 ACTGTCAGTAATATTCTTGCAACTCGCTTTTCCAATACAATCCTTGAACCTCTTTGGAAT 104994 | || |||||| | | || ||| | ||| |||| |||||||||| ||||| Sbjct 1941929 ATGGTACAAAATATTGAAGTATTACGTTTTGCTAATGCAATGTTTGAACCTCTATGGAAC 1941870 Query 104995 AGAGATTATATT 105006 | | |||||| Sbjct 1941869 AATAAATATATT 1941858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563650921844480