Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq89 132 6e-26 >seq89 Length=3091062 Score = 132 bits (146), Expect = 6e-26 Identities = 185/258 (72%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 150981 AGAAATTCTTGATGGAAGAGTAAAGACTTTACATCCAAAGATTCATGGTGGTATTCTTGC 151040 ||||||| | || || ||||| ||||| ||||||||| | |||||||||||| | || Sbjct 2432457 AGAAATTATGGACGGCAGAGTTAAGACATTACATCCATCTGTGCATGGTGGTATTTTAGC 2432398 Query 151041 ACAACGAGGTAATTCTAGTCATGATTTAGATC---TTAAGGTAAATCGTATTGAACCGAT 151097 | | || | ||| || ||| ||||| | | || | | | | |||||| || Sbjct 2432397 AGATCGTGATAAACCTGAACAT---TTAGAACAATTAAAAGAACAACATATTGATTTAAT 2432341 Query 151098 TGATATTGTTGCTGTAAACCTATATCCATTTAAAGAAACTGTTGCTAAACCAGGTGTAAC 151157 ||||| || | || || || || || ||||||||||| |||||||| |||| |||||| Sbjct 2432340 AGATATGGTCGTCGTGAATCTTTACCCGTTTAAAGAAACGGTTGCTAACCCAGATGTAAC 2432281 Query 151158 TCTTGCAGAAGCAATTGAGAATATTGACATTGGTGGTCCTAGTATGGTAAGATCAGCAGC 151217 | || |||||||| |||||||| |||||||| |||| ||| || | ||||||| Sbjct 2432280 AGAAGGTGACGCAATTGAAAATATTGATATTGGTGGCCCTACAATGTTACGTGCAGCAGC 2432221 Query 151218 AAAGAATTATAAACATGT 151235 || || | |||||| || Sbjct 2432220 TAAAAACTTTAAACACGT 2432203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582837785588800