Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_015295.1 Length=47279 Score E Sequences producing significant alignments: (Bits) Value seq157 129 2e-25 >seq157 Length=245904 Score = 129 bits (142), Expect = 2e-25 Identities = 174/238 (73%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 41080 TGGAAAACGCTGTTTGTTTCCGGCCATGCGATGGCTACCGGGCTGGGCGCTG-ACGTGGT 41138 ||||| |||||||||| || || ||||| || |||||||| | || || | | ||||| Sbjct 43551 TGGAAGGCGCTGTTTGTCTCGGGACATGCCATCGCTACCGG-CAGGCCGGGGGAGGTGGT 43609 Query 41139 TCCGGGGCTGGAAGGGGAGTTCTGCAACATCAGAGAATCGACGGCAAAAATGGGAATTAA 41198 | | |||||||| |||||||| |||| |||| | || ||||| | ||||| | || Sbjct 43610 TACCGGGCTGGAGGGGGAGTTTTGCAGCATCCGCGAGAGCACGGCCCAGATGGGCGTAAA 43669 Query 41199 GCGAATGGCTAGTTTGATTGAGTATTCAACTGCGTGGGCCGTGGGTAACGGCGTACAGCT 41258 ||| ||| |||||||||||||| | || ||| | || || ||||| || ||| Sbjct 43670 GCGCATGAACAGTTTGATTGAGTACGCCCAGGCCTGGTCGGTCGGCAACGGGGTCAGGCT 43729 Query 41259 GCGCGAGGTTCGGTA--CGGGAACGATTATTTTGGGAGGGTGGCGTGACAGAAAAATC 41314 ||||||||| || || | || |||||||||||||| || | ||||| |||||| Sbjct 43730 GCGCGAGGTGCGTTATTCAGG--GGATTATTTTGGGAGAGTCGGATGACACTAAAATC 43785 Score = 98.7 bits (108), Expect = 3e-16 Identities = 119/161 (74%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 35017 CAAACTACAGCAAACCGACACAGCGCGAGATTGATCGCGCAGAGACAGACTTACTCATCA 35076 ||||||||||||||||| |||| | || |||||||| || || || ||||| ||||||| Sbjct 40013 CAAACTACAGCAAACCGTCACAACAGGAAATTGATCGTGCTGAAACGGACTTGCTCATCA 40072 Query 35077 CGCTATCACAGCTTACTGGCAGAACGTTTGCAGACATGGCCGGATGGCACGAATCGAAAG 35136 || || | || || || | | ||| || || | ||||| || || ||||||||| Sbjct 40073 TCCTTTCCAAACTGACCGGGCGCAAGTTCGCGGAGTTTGCCGGGTGTCATGAATCGAAAA 40132 Query 35137 TAAGTCGAATGAACTGGCGAGATATCGCAACAGTGTTTTGT 35177 | ||||| | ||||||| |||||| || |||||||| Sbjct 40133 TCAGTCGCACCGACTGGCGCTTTATCGC--CACTGTTTTGT 40171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151168683188484