Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_015457.1 Length=165919 Score E Sequences producing significant alignments: (Bits) Value seq89 105 7e-18 >seq89 Length=3091062 Score = 105 bits (116), Expect = 7e-18 Identities = 192/280 (69%), Gaps = 1/280 (0%) Strand=Plus/Minus Query 41641 ATGTCAGGATACATTCTTTTGCTTGCGCATTCTAAAGCAAGCTGCTTAATATCATAGTTC 41700 || ||||||||||||||||| | | ||| ||||| || | || || |||||||| ||| Sbjct 556794 ATATCAGGATACATTCTTTTAGTAGAGCACTCTAATGCTAATTGTTTTATATCATAATTC 556735 Query 41701 GGATCGTCTTTATAAAGATTAACACCTTCTTCAACGAACATAACAAGTTTAGGGAAAATA 41760 ||||| | | || ||| || |||| || || | | |||||||| ||||| || Sbjct 556734 GGATCTTTCGAACTAAAATTCACGCCTTTTTTAATTGAAAACACAAGTTTTGGGAAGATG 556675 Query 41761 GGAGTTATCCCGTCACGACCAAGACCTTTAATACGATTTTTCAGAATTGCTTTCTGAATC 41820 | ||| || | || ||| | |||||| || | | | || |||||||||| || || Sbjct 556674 GCAGTAATACGATCTTTACCCAAACCTTTGATTCTAGTGTTAAGAATTGCTTGTTGGATT 556615 Query 41821 ATTCGTTCAGTCCAGTCAGTTCCCGTACCAAATGTAATTGTTACAAAAGGCGTTTGCCCG 41880 | || | || ||||| |||||| | |||||||||||| ||||| || Sbjct 556614 TTACGGCTATATGTATCTGTTCCTAATCCAAATCCTAATGTTACAAAAGGTGTTTGACCA 556555 Query 41881 TTTGAACTAAAAAGAGTATTTACTTCATATTCATAAGCTT 41920 ||||| || | | || || | ||||||||| ||| ||| Sbjct 556554 TTTGATGTATACAATGTGTTAATTTCATATTC-TAAACTT 556516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530803497505680