Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq3 102 1e-16 seq23 84.2 3e-11 >seq3 Length=17889087 Score = 102 bits (112), Expect = 1e-16 Identities = 204/302 (68%), Gaps = 3/302 (1%) Strand=Plus/Plus Query 104992 AGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATCGA 105051 ||| ||| | || || ||||||||||||| ||||| ||| ||||| | |||| || Sbjct 15711935 AGGGGATCTTGGGCCTGTTTATGGATTTCAGTGGAGGCATTTCGGAGCCGATTATAAAGA 15711994 Query 105052 CTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAGAAACTAT 105111 | | || || || || || |||||| | |||||||||| || ||| | ||||| Sbjct 15711995 CATGCACACAGATTACACAGGACAAGGTGTCGACCAATTAATGGCTGTAATAAACACTAT 15712054 Query 105112 AAAAAATAACCCCGGGTGTCGAAGAATAATTATAGATAGTTGGAATGTGTCACAATTATC 105171 |||| || ||| ||||| || ||||| |||||| || ||| Sbjct 15712055 TAAAACCAATCCCAATGACCGAAGGATGATTATGTGCGCCTGGAATCCTATGCATTTAGA 15712114 Query 105172 AGATATGGCTCTTCCACCGTGTCATTGTTTGGTACAATTTTACATTAGAAATAAAATTTA 105231 | |||||||| || || || |||||||||||||||||||| || |||| | Sbjct 15712115 CAAGATGGCTCTACCCCCTTGCCATTGTTTGGTACAATTTTATGTTGCAAAT---GGCGA 15712171 Query 105232 TTTAGATTGTCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAATAT 105291 ||| ||| || ||||||| ||||| ||||| | || ||||| || |||| ||| || Sbjct 15712172 ATTATCTTGCCAGCTGTATCAGAGATCGGCAGACATGGGCTTAGGAGTTCCATTTAACAT 15712231 Query 105292 TG 105293 || Sbjct 15712232 TG 15712233 >seq23 Length=8445320 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 152440 AATTTTTGAAAGGAAATCATGGTGATAATTGGCCTTTTGATGGACCCGGACAAATTTTAG 152499 ||||||| | |||| ||||||| ||| | ||||| || || || ||||| ||| Sbjct 4211296 AATTTTTCAGAGGAGATCATGGCGATGGGTTTCCTTTCGACGGGATAGGTCAAATACTAG 4211237 Query 152500 CTCATGCATTTTTTCCTGGTTCTGGAAGAGGAGGAGATGTACATTTTGACATTGAAGAAA 152559 | ||||| |||||||| || ||| | || || || || ||||||||||||||||| | Sbjct 4211236 CCCATGCTTTTTTTCCGGGAGATGGCCGCGGCGGGGACGTCCATTTTGACATTGAAGAGA 4211177 Query 152560 TGTGGA 152565 |||||| Sbjct 4211176 TGTGGA 4211171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658391661483920