Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq13 105 8e-18 >seq13 Length=9188118 Score = 105 bits (116), Expect = 8e-18 Identities = 139/190 (73%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 37446 ATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGA 37505 || |||||||| ||||| | ||||||||| || || |||||||| || || |||||| Sbjct 3474719 ATGTAAGTATCGATTAGAAGTGAATACATTTCGGAATGGATATTTTCTATTGCGATCTGA 3474778 Query 37506 AAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAG 37565 ||||| || |||||||| ||||||| | ||| || || | | |||||| || | ||| Sbjct 3474779 AAACCGTAGAAACACCTCGCTTCAGTCACTTGGACTTCTTGAGAAAACC-GTTCGACAAG 3474837 Query 37566 -TTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATG 37624 |||||||| || ||||| || || || || || || | ||||| || ||| || Sbjct 3474838 ATTTTCATTTACAATCCCGTCCGATGCAGCGAAAAATGCTAAAACATGCGATAAAAAGTG 3474897 Query 37625 TCTTTCATCA 37634 || |||||| Sbjct 3474898 CCTCTCATCA 3474907 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/139 (76%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 36827 TTAAAAATCTTCATCTAACGTAAATTTTATTTCCTTATTACTATTCATAACTCCCATTTT 36886 |||||||||| |||| | |||||| | |||| || ||| |||||| || ||| Sbjct 3473887 TTAAAAATCTGCATCAAGCGTAAAGACATTATCCTCTTTTCTAGCCATAACACCGGCTTT 3473946 Query 36887 TTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTT 36945 ||| ||||| |||||| |||| |||||||| |||||||||||||| || || || | || Sbjct 3473947 TTGGTATTCCCCAACTT-TCTTCTCGAAAAAGTTTGTCTTTCCTTCGAGAGAGATGTGTT 3474005 Query 36946 CCATAAAATCAAATGGATT 36964 ||||||| || || || || Sbjct 3474006 CCATAAAGTCGAACGGGTT 3474024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592306419648080