Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01]
1,402 sequences; 650,477,627 total letters
Query= NC_017968.1
Length=43786
Score E
Sequences producing significant alignments: (Bits) Value
seq89 242 1e-59
>seq89
Length=3091062
Score = 242 bits (268), Expect = 1e-59
Identities = 254/330 (77%), Gaps = 3/330 (1%)
Strand=Plus/Plus
Query 43058 TTTGAGTTTTTCGGTTCTAAAAATTGAATACTATCAGCAATAACTTCCGTAACATATACA 43117
||||| ||||| ||||| | ||||||| |||||| || ||||| || ||| | |||
Sbjct 140307 TTTGA-TTTTTAGGTTCAAGGAATTGAACGCTATCACAAACTACTTCAGTTACAAAAACA 140365
Query 43118 CGTTGACCTTCCTTATTTTCATAATTCCGCGTTTGTAACCTACCATCTACGCCCG-TCAA 43176
|| | ||||| | |||||||| | || | ||| | | ||| || ||||||| | ||
Sbjct 140366 CGACGTCCTTCTTGGTTTTCATAGCTACGTGATTGAATGCGACCGTCAACGCCCGCTAAA 140425
Query 43177 CGATCCTTTAGATAGGTATTTATTAACGTTCTCTGCTTGTTTTTTAAATACGATGATATT 43236
| | ||||| | | ||| ||||| || || |||||||||||| |||| |||| |||
Sbjct 140426 CTA-CCTTTGAACAAGTAGTTATTTACATTATCTGCTTGTTTTCTAAAAACGACACAATT 140484
Query 43237 AATAAAGTCTGCCTCGCGCTCTCCTTGTGCATTCGTAAATGTGCGGTTAACTGCTAATGT 43296
||| || ||||| ||||| || ||||| ||||| ||||| || ||||| ||||||| ||
Sbjct 140485 AATGAAATCTGCTTCGCGTTCCCCTTGCGCATTTGTAAACGTACGGTTTACTGCTAGAGT 140544
Query 43297 GAATGATGCTACACTCACACCTGAAGGAGTGGTTCTGTATTCCGGATCTTTCGTTAAACG 43356
|| | || |||||||| ||||| || || ||||| ||||| |||||||||||||||||
Sbjct 140545 AAAAGTCGCAACACTCACGCCTGAGGGTGTTGTTCTATATTCTGGATCTTTCGTTAAACG 140604
Query 43357 ACCTACTAATACAACTCTATTTAGCATTTA 43386
||| ||||| ||||||||||||| ||||||
Sbjct 140605 ACCGACTAAAACAACTCTATTTATCATTTA 140634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139991269281552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |