Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq157 159 1e-34 >seq157 Length=245904 Score = 159 bits (176), Expect = 1e-34 Identities = 741/1155 (64%), Gaps = 41/1155 (4%) Strand=Plus/Plus Query 39433 CGCGATGGTGAGTTGTTGCAGGTCAAGAGAATCAGCACCGAACGTCCGGACGGGAAGAAA 39492 ||||| ||||||||| ||| |||| | | | | || |||| ||||| || ||| Sbjct 41837 CGCGACGGTGAGTTGAAGCAAATCAAACGGTTGGGGATTGAGCGTCATGACGGTAAAAAA 41896 Query 39493 GTCATCATGGCAGAAGGTGACTGTGAACCCTGTCTGTTCGGATGGCAGGCTCTCGATGCT 39552 |||||||||| || || ||||||||||||||||| || |||||||| || | | Sbjct 41897 ATCATCATGGCGGAGTCCGATTGTGAACCCTGTCTGTTTGGCTGGCAGGCCATCAACCCC 41956 Query 39553 GGCGTGAGGGCT---GTTGTACTTTGCGAAGGCGAAATTGATTGCATGAGCTATGC-GCA 39608 | | | | || || |||| |||||||||||||| |||||| ||| | || Sbjct 41957 AAAGAGCGCAATCTGGTGGTGATTTGTGAAGGCGAAATTGACGCCATGAG-TATTCACCA 42015 Query 39609 ATACGGAATTCCGGCGCTATCTGTCCCGTTCGGTGGCGGGAAAGGCGCTAAACAACAGTG 39668 ||||| ||||||| || || || || ||||||||||| | || || || || ||||| Sbjct 42016 GTACGGCCTTCCGGCACTGTCGGTTCCCTTCGGTGGCGGAACGGGGGCCAAGCAGCAGTG 42075 Query 39669 GATTGAGTTTGAATACCATAACCTAGACAGGTTT-GAGGAAATATTCATTTCGATGGATG 39727 ||||||| ||| ||| | || || | || |||| || || |||||| | | ||||| Sbjct 42076 GATTGAGCATGAGTACGAAAATCT-GTCACGTTTCGAAGAGATATTCCTGTGCATGGACA 42134 Query 39728 TTGATGATGTAGGCCGCGAAGCTGCAAGGGAAATCGCAAGCCGACTGGGTGAACATCGCT 39787 | || | | || | || || | |||||| || | ||| ||||| ||||| | Sbjct 42135 TGGACGCCGCCGGGCAATCCGCCGCCAAGGAAATTGCTACCCGTCTGGGGATCCATCGTT 42194 Query 39788 GTCGTCTGGTTACACTGCCACACAAAGATATCAACGAATGCCTGATGAACGGCGTCGCCG 39847 | | | || | ||| || ||||| || |||||||||||| | || | | | Sbjct 42195 GCAGCTTTGTGAAACTCCCTCACAAGGACGCTAACGAATGCCTGGTCAATAATATTTCAG 42254 Query 39848 AGGATGAAATCTGGCAGTACAT--TGGCACGGCTTCATAC-TTCGACCCGGAAGAACTCT 39904 ||| | | | || | | ||| ||| | | || ||||| || ||||||| Sbjct 42255 TGGAGCAGTTTCAACGGTTCTTCATGG-ACG--CTGAGACGTTCGAACCCACAGAACTCA 42311 Query 39905 ACAGCGCTCGTGAGTTTTACCAGGATACAGTCAATGC--------TTTCTACGGCAAACA 39956 | | || | || || ||||| |||| |||| |||| | || | Sbjct 42312 AACGGGCGGGCGAATTCCGTCAGGA---AGTCCATGCGGCTTTTTTTTCACCCGCTCCCG 42368 Query 39957 GCAGTATCTGTTTAACCCACCGTGGGAAACGCTGGCTTACAACTTCCAGTTCCGTGAGGC 40016 | |||||| | | |||||| ||||||| || || ||| | | || || Sbjct 42369 G-----TCTGTTCACCAGTCCGTGGCCCACGCTGGAGCTGAA-TTTCAGATTCAGGACGC 42422 Query 40017 -GGAGTTAACGCTTGTTAATGGCGTGAACGGTCACGGAAAAACGGAGGTTGTCGGGCATA 40075 || | || || || || ||||| ||||||||||| ||| || || |||| |||||| Sbjct 42423 ACGAACTGACCCTGGTCAACGGCGTTAACGGTCACGGCAAATCGCAGTTTGTGGGGCATC 42482 Query 40076 TGGCACTTGAGGCCATGAGGCAGGGGGTAAAAACATGCGTCGCATCGCTTGAACTGAAGC 40135 |||| |||||||| | | |||||||| | ||| |||| ||| | || || || Sbjct 42483 TGGCGCTTGAGGCGACGTACCAGGGGGTGTCTGCCTGCATCGCCTCGATGGAGCTACGGC 42542 Query 40136 CAGGGATTCTGCTTAAACGCCTGACCCGGCAGTCTACATGT-TGCAAAATGCCGCCAGTT 40194 | | || ||||| ||||| ||| || || | |||| | ||| || | Sbjct 42543 CCGCCATCCTGCTGAAACGGATGATTCGACAAGCCGTATGTACGGGGAATACCTC---AC 42599 Query 40195 CTGGAAATCGAATCAGCAT--TTAAGTTTTACGATGACCGGCTCTGGTTATTTGGCCTGA 40252 | || || | | | || | | | ||||| ||| | ||||| || ||| Sbjct 42600 CGGGGGATGTAGACCGGATGATGGACCTGCTCGATGCGCGGATGTGGTTGTTCAATGTGA 42659 Query 40253 CAGGTACAGCCAAGGCTGAACGCCTGATTGAAATCTTCACATACGC-CAGAAGACGCTAC 40311 |||||| |||||||| || || | | | || | ||| || || ||| ||||| Sbjct 42660 CAGGTAAAGCCAAGGGAGAGCGGATTTTGTCCGTGTTTAAATATGCGCACAAG-CGCTAT 42718 Query 40312 GGCATCCAGTTATTCATCATCGACAGCCTCATGAAGTGCGGTATTGGCGATGACGATTAC 40371 ||| | || | || || | ||| || |||| |||||| || ||| || |||||| Sbjct 42719 GGCGTGAAGCTGTTTGTCGTGGACTCGCTGATGATGTGCGGCCTTAACGAGGATGATTAC 42778 Query 40372 AACGGACAAAAGGCGTTTGTTGACGCGTTGTGCGACTTCAAGAATAAAACAAACTCT-CA 40430 ||||| || ||||||||| | || ||||| ||||| |||||| | | | | | || Sbjct 42779 AACGGCCAGAAGGCGTTTATGGAAGCGTTATGCGAGTTCAAG-CTGACTTACCCGGTGCA 42837 Query 40431 CATTATCCTCGTCACTCACTCCAGAAAGGGAGACAGCGAGGAGAAACCTACCGGAAAGAT 40490 | | | || || || || |||| || || | ||| || || || ||| ||||| Sbjct 42838 TGTGCTGTTGGTGACACATCCCCGAAAAGGCGAAAACGAAGAAAAGCCGGTCGGCAAGAT 42897 Query 40491 GGACGTAAAAGGCTCAGGAGCGATTACAGACCTGACAGATAACCTGTTTATCATCTGGCG 40550 ||| || || || || || || || || |||| || |||||| | | | | ||||| Sbjct 42898 GGATGTCAAGGGAAGCGGCGCTATCACGGATTTGACCGACAACCTGCTCACCGTTTGGCG 42957 Query 40551 CAATAAAGCTCGCGA 40565 |||||| || || || Sbjct 42958 CAATAAGGCGCGTGA 42972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157046985320472