Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cimex_20lectularius_20[refseq_20GCF_5F000648675.1_202014-05-01] 1,402 sequences; 650,477,627 total letters Query= NC_019398.1 Length=178193 Score E Sequences producing significant alignments: (Bits) Value seq157 156 5e-33 >seq157 Length=245904 Score = 156 bits (172), Expect = 5e-33 Identities = 677/1052 (64%), Gaps = 49/1052 (5%) Strand=Plus/Minus Query 153200 GCCCGTGCATACATCGAATATCGCCACGATCGCGATATTGCCCGTGAACAGAAAAGTAAG 153259 || ||| | ||||| || || || |||||||| ||| | ||||| ||||| | | Sbjct 54063 GCGCGTACCTACATTGAGTACCGTCACGATCGTGATGTCGCCCGCGAACA----ACGCTG 54008 Query 153260 CTGTTCAAA----GATATCTCCGGTATGGTGAATCTGTCCAACAAAGAGATCACCAACGA 153315 | ||| || || || |||| |||| | | | ||||| | | |||||| Sbjct 54007 CCGTTTGAATCAGGAAATTCGCGGTCTGGTTGAACAGAGCAACATGGCTCTGCTCAACGA 53948 Query 153316 GAACGCGAACAAAGACGCAAGGGTATTCCCTACACAGCGCGATCTGCTGGCTGGTATCGT 153375 |||||| ||||||||| | || ||||||| |||||||| |||||||| |||||||| Sbjct 53947 GAACGCCAACAAAGACAGTAAAGTGATCCCTACCCAGCGCGACCTGCTGGCCGGTATCGT 53888 Query 153376 AGCGAAACACT-TCGCACGTAACCACATTCTGCCAAAACACATTGTAGAAGCGCATGATT 153434 || || |||| | || | || || || ||||| || | || || ||||| Sbjct 53887 TGCCAAGCACTATGCCAAGCAA-CATATCCTGCCGCGCGACGTGGTGATTGCCCATGAAC 53829 Query 153435 CTGGTGATATCCATTATCATGATCTGGATTACAGCCCGTTC-ACGCCATACACAAACTGC 153493 ||||| || || || || |||||||| ||| ||||||| | | || | ||||| Sbjct 53828 GCGGTGAAATTCACTACCACGATCTGGACTACTCCCCGTTCTTCCCGATGTTC-AACTGT 53770 Query 153494 TGTCTGGTGGATTTGAAAGGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCAGACATC 153553 || | || | |||| ||| || | || || |||||||||||||||||||| || Sbjct 53769 ATGCTTATCGACCTTGAAGGCATGTTGACCAAAGGGTTCAAGATGGGTAACGCAGAGATT 53710 Query 153554 GAACCCCCGAAATCAATCGGTGTTGCGACTGCTCTTATGGCACAGATCACCGCACAGATT 153613 || || || ||||| ||| ||||| || | | ||| || |||| ||| ||| | Sbjct 53709 GAGCCGCCAAAATCCATCTCAACCGCGACGGCAGTGACGGCCCAAATCATCGCGCAGGTG 53650 Query 153614 GCCTCTCACCAGTACGGCGGGACAACCTTTGCTAACG--TTGATAAAGTGCTGGCTCCAT 153671 || ||| |||||||| || ||| || | || | ||| || | ||||| || | Sbjct 53649 GCAAGCCACATCTACGGCGGCACCACCATT--AACCGTATCGATGAAATTCTGGCACCGT 53592 Query 153672 ATGT--TCAAATGACATATGATAAGCACTTTAAAGATGCCAAAAAGTATCAAATCCCTCG 153729 || | | |||| | |||||| || || | ||| || || || Sbjct 53591 TCGTCACCGCTAGCCATA--AAAAGCACCGGGAAACCGCTGATGAGTGGCACATTCCCGA 53534 Query 153730 TGATGTTCAGTATGCAATAGATAAAACTGAAAAGGATGTTTTCGACGCGTTTCAGTCATA 153789 || | ||||| | | || | || | |||||| || ||||| Sbjct 53533 TGCGGACGCCTATGCGCTGTCTCGTACCTA----GAGTGCTACGACGCCTTCCAGTCGCT 53478 Query 153790 TGAATACGAAGTAAACACCCTGCATACTGCGAACGGTCAAACCCCGTTTGTTACAATTAC 153849 ||||| |||||||| || ||||| ||||| || ||||| || ||||| || || || Sbjct 53477 GGAATATGAAGTAAATACGCTGCACACTGCCAATGGTCAGACGCCGTTCGTCAC-CTTTG 53419 Query 153850 GTTCGGTACTGGTCAATCCCGATGTGAA---CGCATGATCCAGAAAGCGATTCTGAAAAA 153906 ||| | || | || || | || ||| || |||||||| || | || ||| || Sbjct 53418 GTTTCGACCTCGGCA--CCAGTTGGGAATCGCGTCTGATCCAGCAATCCATCCTGCGCAA 53361 Query 153907 CCGTATTCGCGGCCTGGGTAAAGAGGGTATCACTCCGGTATTCCCGAAACTGGTTATGTT 153966 ||||||| ||| ||||| ||| | ||| ||| |||| ||||| ||||||| |||| Sbjct 53360 CCGTATTGCCGGTCTGGGCAAAAACCGTAAAACTGCGGTGTTCCCCAAACTGG---TGTT 53304 Query 153967 C---ATGGAAAAAGGAATCAACCTTGATCCAGAGGATCGCAACTATGACATCAAACAACT 154023 | || | || |||| | | | | |||| |||||||||||||| ||||| Sbjct 53303 CGCTATCCGCGACGGTGTCAATCACAAGGCTGCCGATCCGAACTATGACATCAAGCAACT 53244 Query 154024 TGCCCTGGAATGTGCTTCTAAACGCATGTACCCAGATATCATTAGTTCAGCTAACAACCG 154083 || ||||| || | || || |||||||| |||||| | | || || | | Sbjct 53243 GGCACTGGATTGCTCCAGCAAGCGGATGTACCCGGATATCCTCAATT------ACGATCA 53190 Query 154084 TGCTATTACTGGTTCTAGCGTTCCTGTA--TCTCCTATGGGTTGTCGCAGTTTCCTTAGC 154141 | | ||| |||| | | || | || | || ||||| || | ||| |||||| || Sbjct 53189 GGTTGTTA-AGGTTACCG-GCTCGTTTAAGACGCCCATGGGCTGCCACAGCTTCCTTGGC 53132 Query 154142 GTGTGGCATGATGATAACGGTAATGAAATTCTTGATGGACGTAATAACCTGGGTGTGGTG 154201 |||| |||| || | || || | || | ||||| || || ||||| || || | Sbjct 53131 GTGT---ATGAGGAAGAGGGCAAGCAGATCCACGATGGTCGCAACAACCTCGGGGTAATC 53075 Query 154202 ACAATCAACCTCCCGCGTATTGCTCTTGAAGC 154233 | ||||||| ||||| || || || ||||| Sbjct 53074 AGCCTCAACCTGCCGCGCATCGCGCTGGAAGC 53043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570079609179760